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scnpilot_solids2_trim150_scaffold_14_curated

Search features with annotation key words

Displaying items 151-180 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_14_curated_151
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166588..167913)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETN8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV07622.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
lipoprotein releasing system, transmembrane protein, LolC/E family
scnpilot_solids2_trim150_scaffold_14_curated_152
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(167910..169238)
DNA (1329bp) protein (443aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01570}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
prolyl-tRNA synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003815A82
prolyl-tRNA synthetase, family II
scnpilot_solids2_trim150_scaffold_14_curated_153
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169706..170752)
DNA (1047bp) protein (349aa)
Putative taurine catabolism dioxygenase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KID2_MESAW
putative taurine catabolism dioxygenase
Putative taurine catabolism dioxygenase {ECO:0000313|EMBL:AGB44771.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_14_curated_154
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170945..171685
DNA (741bp) protein (247aa)
Molybdopterin binding domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y665_9RHIZ
Molybdopterin binding domain-containing protein {ECO:0000313|EMBL:CDX27182.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative nuleotide-utilizing enzyme, moeA
scnpilot_solids2_trim150_scaffold_14_curated_155
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

171682..172902
DNA (1221bp) protein (407aa)
monooxygenase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003496F87
Uncharacterized protein {ECO:0000313|EMBL:KIF65934.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_14_curated_156
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173003..173341
DNA (339bp) protein (113aa)
UPI0003CFB668 related cluster n=1 Tax=unknown RepID=UPI0003CFB668
Antibiotic resistance protein VanZ {ECO:0000313|EMBL:ESZ67721.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
VanZ family protein
scnpilot_solids2_trim150_scaffold_14_curated_157
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173425..173769
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZ92_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH84737.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids2_trim150_scaffold_14_curated_158
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173777..175252)
DNA (1476bp) protein (492aa)
cobyric acid synthase; K02232 adenosylcobyric acid synthase [EC:6.3.5.10]
cobyric acid synthase n=1 Tax=Rhizobium loti RepID=UPI00037FB8AE
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
scnpilot_solids2_trim150_scaffold_14_curated_159
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(175249..175860)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSW4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56190.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_14_curated_160
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175966..177144
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSW5_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHK56191.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acyl-CoA dehydrogenase
scnpilot_solids2_trim150_scaffold_14_curated_161
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177221..178105
DNA (885bp) protein (295aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSW6_9RHIZ
scnpilot_solids2_trim150_scaffold_14_curated_162
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178455..181016)
DNA (2562bp) protein (854aa)
UPI0003CE5C33 related cluster n=1 Tax=unknown RepID=UPI0003CE5C33
Dehydrogenase {ECO:0000313|EMBL:ESY70844.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
glycine cleavage T protein (aminomethyl transferase)
scnpilot_solids2_trim150_scaffold_14_curated_163
unknown

Not on your lists

181286..181525
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_14_curated_164
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181474..181770)
DNA (297bp) protein (99aa)
Nucleotidyltransferase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8ADB0_RHIRD
Putative nucleotidyltransferase {ECO:0000313|EMBL:CDN51439.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Nucleotidyltransferase
scnpilot_solids2_trim150_scaffold_14_curated_165
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181873..182892)
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=ILVC_RHILO
scnpilot_solids2_trim150_scaffold_14_curated_166
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182915..183550)
DNA (636bp) protein (212aa)
TetR family transcription regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT91_9RHIZ
TetR family transcription regulator {ECO:0000313|EMBL:EHK56032.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_14_curated_167
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183777..184127
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A608A
Putative membrane protein {ECO:0000313|EMBL:CDM60272.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
putative transmembrane protein
scnpilot_solids2_trim150_scaffold_14_curated_168
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184131..184901
DNA (771bp) protein (257aa)
UPI0003D02FEF related cluster n=1 Tax=unknown RepID=UPI0003D02FEF
HAD hydrolase {ECO:0000313|EMBL:ESZ30387.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein; K07025 putative hydrolase of the HAD superfamily
scnpilot_solids2_trim150_scaffold_14_curated_169
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184870..186069)
DNA (1200bp) protein (400aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THB0_MESCW
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADV12435.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_14_curated_170
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186190..187014)
DNA (825bp) protein (275aa)
aldo/keto reductase (EC:1.1.1.274); K05885 2,5-diketo-D-gluconate reductase [EC:1.1.1.274]
2,5-didehydrogluconate reductase n=1 Tax=Nitratireductor indicus C115 RepID=K2NNV4_9RHIZ
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:EKF41060.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids2_trim150_scaffold_14_curated_171
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187099..188109
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX12790.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_14_curated_172
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188106..188582
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56648.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
isoprenylcysteine carboxyl methyltransferase
scnpilot_solids2_trim150_scaffold_14_curated_173
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188702..189085
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CHR2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKC32620.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_14_curated_174
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189086..190360
DNA (1275bp) protein (425aa)
ECF subfamily RNA polymerase sigma-70 factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPP5_9RHIZ
ECF subfamily RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EHK57338.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_14_curated_175
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190367..191578)
DNA (1212bp) protein (404aa)
Di-heme cytochrome C peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5]
UPI0003CE1AEB related cluster n=1 Tax=unknown RepID=UPI0003CE1AEB
Methylamine utilization protein {ECO:0000313|EMBL:CDX58979.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
scnpilot_solids2_trim150_scaffold_14_curated_176
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191581..192018)
DNA (438bp) protein (146aa)
Auxin-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HST7_9RHIZ
Auxin-binding protein {ECO:0000313|EMBL:EHK56163.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
auxin-binding protein
scnpilot_solids2_trim150_scaffold_14_curated_177
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192164..193084
DNA (921bp) protein (307aa)
Ketodeoxygluconokinase {ECO:0000313|EMBL:CCV07488.1}; EC=2.7.1.45 {ECO:0000313|EMBL:CCV07488.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
Ketodeoxygluconokinase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUA3_9RHIZ
scnpilot_solids2_trim150_scaffold_14_curated_178
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193132..194184)
DNA (1053bp) protein (351aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3]
UPI0003CED88B related cluster n=1 Tax=unknown RepID=UPI0003CED88B
scnpilot_solids2_trim150_scaffold_14_curated_179
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(194156..195613)
DNA (1458bp) protein (486aa)
Succinate-semialdehyde dehydrogenase I, NADP-dependent {ECO:0000313|EMBL:CDX44530.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CDX44530.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UPI0003CEE9C9 related cluster n=1 Tax=unknown RepID=UPI0003CEE9C9
succinate-semialdehyde dehydrogenase
scnpilot_solids2_trim150_scaffold_14_curated_180
unknown

Not on your lists

195628..195930
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying items 151-180 of 248 in total

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