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scnpilot_solids2_trim150_scaffold_14_curated

Search features with annotation key words

Displaying items 181-210 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_14_curated_181
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195804..196754)
DNA (951bp) protein (317aa)
Transporter n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G895_9RHIZ
Transporter {ECO:0000313|EMBL:ESZ16870.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
auxin efflux carrier; K07088
scnpilot_solids2_trim150_scaffold_14_curated_182
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196861..198393
DNA (1533bp) protein (511aa)
carboxyl transferase; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
UPI0003CFA6D8 related cluster n=1 Tax=unknown RepID=UPI0003CFA6D8
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:ESY91064.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
scnpilot_solids2_trim150_scaffold_14_curated_183
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198652..200130
DNA (1479bp) protein (493aa)
UPI0003CF95A3 related cluster n=1 Tax=unknown RepID=UPI0003CF95A3
MFS transporter {ECO:0000313|EMBL:ESY73391.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
major facilitator superfamily protein
scnpilot_solids2_trim150_scaffold_14_curated_184
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200355..200519
DNA (165bp) protein (55aa)
UPI0003CECEF8 related cluster n=1 Tax=unknown RepID=UPI0003CECEF8
Uncharacterized protein {ECO:0000313|EMBL:ESW92805.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_14_curated_185
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(200617..203277)
DNA (2661bp) protein (887aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS52_9RHIZ
scnpilot_solids2_trim150_scaffold_14_curated_186
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(203425..204513)
DNA (1089bp) protein (363aa)
Recombinase RecA n=96 Tax=Rhizobiales RepID=V7F2B4_9RHIZ
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
recA protein; K03553 recombination protein RecA
scnpilot_solids2_trim150_scaffold_14_curated_187
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204771..205712
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367194B
Carbohydrate kinase {ECO:0000313|EMBL:EHH04552.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
sugar kinase, ribokinase
scnpilot_solids2_trim150_scaffold_14_curated_188
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

205709..206668
DNA (960bp) protein (320aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS55_9RHIZ
Indigoidine synthase A family protein
scnpilot_solids2_trim150_scaffold_14_curated_189
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206800..207447)
DNA (648bp) protein (216aa)
cell envelope biogenesis protein OmpA n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EB901
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:EXL01719.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
OmpA/MotB
scnpilot_solids2_trim150_scaffold_14_curated_190
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207716..208786
DNA (1071bp) protein (357aa)
amino acid-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003641294
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDX49736.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
amino acid binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_14_curated_191
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208790..209794
DNA (1005bp) protein (335aa)
peptidase T4 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D98B2E
Uncharacterized protein {ECO:0000313|EMBL:CDX11881.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
L-aminopeptidase/D-esterase
scnpilot_solids2_trim150_scaffold_14_curated_192
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209856..211157
DNA (1302bp) protein (434aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98NM2_RHILO
scnpilot_solids2_trim150_scaffold_14_curated_193
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211216..211476
DNA (261bp) protein (87aa)
prevent-host-death protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00031C1222
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_solids2_trim150_scaffold_14_curated_194
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211479..211886
DNA (408bp) protein (136aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
Ribonuclease VapC n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R2D7_RALPI
PilT protein domain-containing protein; K07062
scnpilot_solids2_trim150_scaffold_14_curated_195
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211890..212702)
DNA (813bp) protein (271aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS25_9RHIZ
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EHK56450.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K07104
scnpilot_solids2_trim150_scaffold_14_curated_196
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212925..213407
DNA (483bp) protein (161aa)
UPI0003D01525 related cluster n=1 Tax=unknown RepID=UPI0003D01525
Alpha/beta hydrolase {ECO:0000313|EMBL:ESZ76139.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
hypothetical protein; K07002
scnpilot_solids2_trim150_scaffold_14_curated_197
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213489..214259
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TP3_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ04691.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_solids2_trim150_scaffold_14_curated_198
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214366..215142)
DNA (777bp) protein (259aa)
HpcH/HpaI aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
HpcH/HpaI aldolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS27_9RHIZ
HpcH/HpaI aldolase {ECO:0000313|EMBL:EHK56452.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_14_curated_199
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215248..215574)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TFC3_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESZ27769.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
scnpilot_solids2_trim150_scaffold_14_curated_200
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215832..216626
DNA (795bp) protein (265aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRY8_9RHIZ
scnpilot_solids2_trim150_scaffold_14_curated_201
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216659..216901
DNA (243bp) protein (81aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
phosphoribosylformylglycinamidine synthase subunit PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
UPI0003CE8B55 related cluster n=1 Tax=unknown RepID=UPI0003CE8B55
scnpilot_solids2_trim150_scaffold_14_curated_202
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217768..217965
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F0W6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX23300.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
DNA binding domain-containing protein
scnpilot_solids2_trim150_scaffold_14_curated_203
unknown

Not on your lists

218046..218327
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_14_curated_204
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218443..221190
DNA (2748bp) protein (916aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YJR1_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EAS50812.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
primase 2
scnpilot_solids2_trim150_scaffold_14_curated_205
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

221882..222160
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX62877.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
scnpilot_solids2_trim150_scaffold_14_curated_206
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222157..222501
DNA (345bp) protein (115aa)
UPI0003CFDE96 related cluster n=1 Tax=unknown RepID=UPI0003CFDE96
Uncharacterized protein {ECO:0000313|EMBL:CDX34713.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_14_curated_207
unknown

Not on your lists

comp(222490..222594)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_14_curated_208
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222591..223181)
DNA (591bp) protein (197aa)
UPI0003CE3797 related cluster n=1 Tax=unknown RepID=UPI0003CE3797
Resolvase {ECO:0000313|EMBL:ESZ34536.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
Resolvase domain-containing protein
scnpilot_solids2_trim150_scaffold_14_curated_209
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(223304..224500)
DNA (1197bp) protein (399aa)
Integrase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSR0_9BRAD
integrase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_solids2_trim150_scaffold_14_curated_210
unknown

Not on your lists

224725..224946
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying items 181-210 of 248 in total

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