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scnpilot_solids2_trim150_scaffold_479_curated

Search features with annotation key words

Displaying items 31-41 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_479_curated_31
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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27030..28040
DNA (1011bp) protein (337aa)
alcohol dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037692B8
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:EIM24592.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
alcohol dehydrogenase groes domain protein
scnpilot_solids2_trim150_scaffold_479_curated_32
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28302..29204)
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U812_METS4
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACA19728.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_479_curated_33
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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29284..30039
DNA (756bp) protein (252aa)
Short-chain type dehydrogenase/reductase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98B18_RHILO
short-chain type dehydrogenase/reductase
Short-chain type dehydrogenase/reductase {ECO:0000313|EMBL:BAB52154.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_479_curated_34
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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30045..30899
DNA (855bp) protein (285aa)
transketolase; K00615 transketolase [EC:2.2.1.1]
UPI0003D0467D related cluster n=1 Tax=unknown RepID=UPI0003D0467D
Transketolase {ECO:0000313|EMBL:ESZ27403.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
scnpilot_solids2_trim150_scaffold_479_curated_35
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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30896..31963
DNA (1068bp) protein (356aa)
PROBABLE TRANSKETOLASE BETA SUBUNIT PROTEIN n=1 Tax=Rhizobium loti RepID=Q8KJJ6_RHILI
PROBABLE TRANSKETOLASE BETA SUBUNIT PROTEIN {ECO:0000313|EMBL:CAD31488.1}; TaxID=381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (Mesorhizobium loti).;"
putative 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE
scnpilot_solids2_trim150_scaffold_479_curated_36
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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32037..33032
DNA (996bp) protein (332aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Rhizobium sp. AP16 RepID=J2DEK1_9RHIZ
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:GAK72815.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
TRAP dicarboxylate transporter substrate-binding protein DctP subunit
scnpilot_solids2_trim150_scaffold_479_curated_37
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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33059..33604
DNA (546bp) protein (182aa)
TRAP dicarboxylate transporter, DctP-like subunit n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B456_RHIRD
TRAP transporter {ECO:0000313|EMBL:KJR61670.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
TRAP dicarboxylate transport system, small permease component (DctQ-like)
scnpilot_solids2_trim150_scaffold_479_curated_38
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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33601..34857
DNA (1257bp) protein (419aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE27_ALIDK
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:GAO23195.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
TRAP dicarboxylate transporter subunit DctM
scnpilot_solids2_trim150_scaffold_479_curated_39
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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35484..35954
DNA (471bp) protein (157aa)
Transcriptional regulator syrB n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIW6_9RHIZ
Transcriptional regulator syrB {ECO:0000313|EMBL:CCV16355.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transcriptional regulator; K07497 putative transposase
scnpilot_solids2_trim150_scaffold_479_curated_40
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36201..37271)
DNA (1071bp) protein (357aa)
UPI0003CF5A9E related cluster n=1 Tax=unknown RepID=UPI0003CF5A9E
Uncharacterized protein {ECO:0000313|EMBL:EZQ14531.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_479_curated_41
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37680..37928
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11N87_MESSB
Uncharacterized protein {ECO:0000313|EMBL:EXL04900.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
Displaying items 31-41 of 41 in total

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