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scnpilot_solids2_trim150_scaffold_1_curated

Search features with annotation key words

Displaying items 391-420 of 463 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1_curated_391
bacterium YEK0313, Bacteria

Not on your lists

comp(404838..406535)
DNA (1698bp) protein (566aa)
fadD; long-chain fatty-acid--CoA ligase (EC:6.2.1.3)
Dicarboxylate-CoA ligase PimA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P397_9BRAD
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEJ12833.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_1_curated_392
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(406532..408625)
DNA (2094bp) protein (698aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031AD367
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EHK56342.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_1_curated_393
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(408712..409500)
DNA (789bp) protein (263aa)
3-oxoadipate enol-lactonase; K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24]
3-oxoadipate enol-lactonase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MK55_9RHIZ
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:EKF17602.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
scnpilot_solids2_trim150_scaffold_1_curated_394
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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409623..410474
DNA (852bp) protein (284aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SJ13_9BRAD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCD94190.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_395
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(410634..411803)
DNA (1170bp) protein (390aa)
Cystathionine gamma-synthase, PLP-dependent {ECO:0000313|EMBL:CDX13705.1}; EC=2.5.1.48 {ECO:0000313|EMBL:CDX13705.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cystathionine beta-lyase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C8529
cystathionine beta-lyase/cystathionine gamma-synthase
scnpilot_solids2_trim150_scaffold_1_curated_396
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411800..413188)
DNA (1389bp) protein (463aa)
Cystathionine beta-synthase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHV8_9RHIZ
Cystathionine beta-synthase {ECO:0000313|EMBL:EHH07195.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
cysteine synthase
scnpilot_solids2_trim150_scaffold_1_curated_397
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(413347..414108)
DNA (762bp) protein (254aa)
ABC transporter permease protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQF6_9RHIZ
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
permease, ABC-2-type transport system; K01992 ABC-2 type transport system permease protein
scnpilot_solids2_trim150_scaffold_1_curated_398
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(414105..415136)
DNA (1032bp) protein (344aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C724F
ABC transporter-like protein {ECO:0000313|EMBL:EHK57040.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_399
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

415355..416908
DNA (1554bp) protein (518aa)
ABC-type sugar transport system, ATPase component n=1 Tax=Rhizobium sp. CF080 RepID=J3BBU6_9RHIZ
Putative ABC transporter, ATP binding subunit ( high-affinity D-ribose transport) {ECO:0000313|EMBL:CDN55458.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
putative ribose/xylose/arabinose/galactoside ABC transporter, ATP-binding component
scnpilot_solids2_trim150_scaffold_1_curated_400
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

416911..417915
DNA (1005bp) protein (335aa)
Ribose ABC transporter membrane spanning protein n=2 Tax=Rhizobium RepID=K5CV93_RHILU
putative ribose/xylose/arabinose/galactoside ABC transporter, permease component
Xylose ABC transporter, permease protein XylH {ECO:0000313|EMBL:KIV66811.1}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
scnpilot_solids2_trim150_scaffold_1_curated_401
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

418004..418951
DNA (948bp) protein (316aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0CF37_RHILT
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJC77885.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
sugar ABC transporter; K10439 ribose transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_402
unknown

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419030..419281
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_403
unknown

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419278..419391
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_404
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(419481..420947)
DNA (1467bp) protein (489aa)
TonB family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HST0_9RHIZ
TonB family protein {ECO:0000313|EMBL:EHK56217.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_405
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(420952..421416)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FE62_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX44562.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_406
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421420..423615)
DNA (2196bp) protein (732aa)
TonB-dependent heme/hemoglobin receptor family protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU95_9RHIZ
TonB-dependent heme/hemoglobin receptor family protein {ECO:0000313|EMBL:CCV07478.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
TonB-dependent heme/hemoglobin receptor family protein; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_1_curated_407
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

423825..424034
DNA (210bp) protein (70aa)
Hemin uptake protein hemP n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGL9_9RHIZ
Hemin uptake protein hemP {ECO:0000313|EMBL:ESX74180.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Hemin uptake protein hemP
scnpilot_solids2_trim150_scaffold_1_curated_408
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

424044..425099
DNA (1056bp) protein (352aa)
UPI0003CE81E2 related cluster n=1 Tax=unknown RepID=UPI0003CE81E2
Iron transporter {ECO:0000313|EMBL:ESY60252.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
hemin-degrading family protein; K07225 putative hemin transport protein
scnpilot_solids2_trim150_scaffold_1_curated_409
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

425121..426032
DNA (912bp) protein (304aa)
Periplasmic binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCX3_9RHIZ
Periplasmic binding protein {ECO:0000313|EMBL:EHH10445.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ABC-type hemin transport system, periplasmic component
scnpilot_solids2_trim150_scaffold_1_curated_410
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

426036..427235
DNA (1200bp) protein (400aa)
UPI0003CF92B2 related cluster n=1 Tax=unknown RepID=UPI0003CF92B2
Heme ABC transporter permease {ECO:0000313|EMBL:ESY70921.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
ABC transporter permease; K02015 iron complex transport system permease protein
scnpilot_solids2_trim150_scaffold_1_curated_411
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

427245..428036
DNA (792bp) protein (264aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Hemin importer ATP-binding subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSS2_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_412
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(428058..428513)
DNA (456bp) protein (152aa)
transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E5F495
Transcriptional regulator {ECO:0000313|EMBL:EZQ16711.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
rirA; iron-responsive transcriptional regulator; K13772 Rrf2 family transcriptional regulator, iron-responsive regulator
scnpilot_solids2_trim150_scaffold_1_curated_413
Tatumella morbirosei, Tatumella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(428634..429893)
DNA (1260bp) protein (420aa)
dyp-type peroxidase family protein; K15733 dye decolorizing peroxidase [EC:1.11.1.19]
Dyp-type peroxidase family n=1 Tax=Rahnella sp. (strain Y9602) RepID=E8XRF5_RAHSY
Peroxidase {ECO:0000313|EMBL:KKA63544.1}; TaxID=642227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Tatumella.;" source="Tatumella morbirosei.;"
scnpilot_solids2_trim150_scaffold_1_curated_414
Tatumella ptyseos, Tatumella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(429893..431095)
DNA (1203bp) protein (401aa)
Peptidase M75, Imelysin n=1 Tax=Serratia sp. M24T3 RepID=I0QX97_9ENTR
Ferrous iron transport periplasmic protein {ECO:0000313|EMBL:KFD19812.1}; TaxID=1005995 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Tatumella.;" source="Tatumella ptyseos ATCC 33301.;"
Peptidase M75, Imelysin; K07224 putative lipoprotein
scnpilot_solids2_trim150_scaffold_1_curated_415
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431082..432713)
DNA (1632bp) protein (544aa)
iron permease n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3FFDE
Uncharacterized protein {ECO:0000313|EMBL:AJY45384.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
iron permease; K07243 high-affinity iron transporter
scnpilot_solids2_trim150_scaffold_1_curated_416
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(433124..433969)
DNA (846bp) protein (282aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Rhizobium sp. CF122 RepID=J3BM42_9RHIZ
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJL53499.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein
scnpilot_solids2_trim150_scaffold_1_curated_417
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(433973..434878)
DNA (906bp) protein (302aa)
ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036A54C0
ABC transporter permease {ECO:0000313|EMBL:EPE94591.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
ABC transporter permease
scnpilot_solids2_trim150_scaffold_1_curated_418
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(434878..435954)
DNA (1077bp) protein (359aa)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00035D0443
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EJL53497.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
ugpC; ABC transporter nucleotide binding/ATPase (sn-Glycerol-3-phosphate); K02052 putative spermidine/putrescine transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_419
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(436174..437352)
DNA (1179bp) protein (393aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036DC6F7
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:CDM63285.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
ABC transporter substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_1_curated_420
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

437604..438326
DNA (723bp) protein (241aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2AVY8_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJJ27605.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
putative GntR family transcriptional regulator
Displaying items 391-420 of 463 in total

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