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scnpilot_solids2_trim150_scaffold_1_curated_418

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(434878..435954)

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00035D0443 similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 353.0
  • Bit_score: 507
  • Evalue 8.80e-141
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EJL53497.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 350.0
  • Bit_score: 503
  • Evalue 3.00e-139
ugpC; ABC transporter nucleotide binding/ATPase (sn-Glycerol-3-phosphate); K02052 putative spermidine/putrescine transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 359.0
  • Bit_score: 492
  • Evalue 1.60e-136

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
TTGGCGGACAAAGGCAAATCACCGCAGAGCGGCCGTCTCGAACTGGTCGGCGTCCGCCGCACCTTCGGCAATTACAACGCGCTCGACGGCATCGATCTCACCGTCGAACCGGGCGAGTTCATCGCCCTTCTCGGCCCTTCCGGCTGCGGCAAGTCGACCGCGCTCAACTGCATCGCCGGGCTGCTCGAACTGACCGGCGGCGAAATAAGGCTGGCCGGAAAGCGCATCGATGAATTGCAGACCGAGGCGCGCGGCTTCGGCATGGTTTTCCAGAACTACGCGCTGTTCCCGCATATGAGCGTGCGCAAGAATGTCGGCTTCGGCCTGTCCATGCAAAGCGTGCCGGGCGGAGAGGCAGCAAAGCGCATCTCGGAAGCGCTGGCGCTCGTGCGCCTGCAGGGACAGGAAGGCAAGCTCCCCGGCCAGCTTTCCGGCGGCCAGCAACAGCGCGTTGCGATCGCGCGCGCCATCGTCATCCGCCCGCCGCTCGTTCTCATGGACGAGCCGCTCTCCAATCTGGACGCCAAGCTTCGGCTCGAGATGCGCGCCGAAATACGCGGCATCCACGACCAGATCGGCTCCACCACGATCTATGTCACGCACGACCAGGACGAGGCGCTGTCGCTTGCCGACCGCGTCGTGGTCATGAGCGAGGGCCGGATCCGCCAGATCGGCACGCCGCAGGATCTCTACGAGCGGCCGAACCATGCCGACGTCGCCGACTTCATGGGTTTCCGCACGCGTATTCCGGGGCGGCTCGTAAAGGCTTCCAACGGCCAGGCAGCCGTCGAGGCCGGAGGCACGACGCTGGAAGGGATCGCGGCCGATGGCATGTCGCCCGGCGACAAGGTGCTTGTGTCGATCCGGCCGGAAGACCTCGTCGCGATCGATGAGGGCGAGGGGCTGAAGGCGACCGTCAAAAGCATAGAATATCGCGGCCGCGCCTTCTTCGGCCTGGCGAGCGGCACGGACGGCACCGAACTCTTCTTCCGCGCCGACAGGACCTATCCGCGCGGCGCTTCCATCGTGCTGAGGCCGCTGGCGGAGCGCGCGCTGCTATTCGCGGAGAAGGCGTGA
PROTEIN sequence
Length: 359
LADKGKSPQSGRLELVGVRRTFGNYNALDGIDLTVEPGEFIALLGPSGCGKSTALNCIAGLLELTGGEIRLAGKRIDELQTEARGFGMVFQNYALFPHMSVRKNVGFGLSMQSVPGGEAAKRISEALALVRLQGQEGKLPGQLSGGQQQRVAIARAIVIRPPLVLMDEPLSNLDAKLRLEMRAEIRGIHDQIGSTTIYVTHDQDEALSLADRVVVMSEGRIRQIGTPQDLYERPNHADVADFMGFRTRIPGRLVKASNGQAAVEAGGTTLEGIAADGMSPGDKVLVSIRPEDLVAIDEGEGLKATVKSIEYRGRAFFGLASGTDGTELFFRADRTYPRGASIVLRPLAERALLFAEKA*