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scnpilot_solids2_trim150_scaffold_2374_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2374_curated_1
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(606..872)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB97006.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
scnpilot_solids2_trim150_scaffold_2374_curated_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(896..1300)
DNA (405bp) protein (135aa)
Methylmalonyl-CoA epimerase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRL7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX26195.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
methylmalonyl-CoA epimerase
scnpilot_solids2_trim150_scaffold_2374_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1324..2991)
DNA (1668bp) protein (556aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRL8_9RHIZ
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:EHK56642.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
RNA-metabolising metallo-beta-lactamase
scnpilot_solids2_trim150_scaffold_2374_curated_4
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2981..3520)
DNA (540bp) protein (180aa)
birA; biotin--[acetyl-CoA-carboxylase] synthetase (EC:6.3.4.15)
Probable biotin--[acetyl-CoA-carboxylase] synthetase {ECO:0000313|EMBL:CAC45859.1}; EC=6.3.4.15 {ECO:0000313|EMBL:CAC45859.1};; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
biotin biosynthesis protein n=1 Tax=Rhizobium meliloti RepID=UPI00035E5E1B
scnpilot_solids2_trim150_scaffold_2374_curated_5
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3769..5205)
DNA (1437bp) protein (479aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
NADH dehydrogenase subunit N (EC:1.6.5.3); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Rhizobium loti RepID=UPI0003722B6B
scnpilot_solids2_trim150_scaffold_2374_curated_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5218..6726)
DNA (1509bp) protein (503aa)
NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M) {ECO:0000313|EMBL:CDX29667.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDX29667.1};; EC=1.6.99.5 {ECO:0000313|EMBL:CDX29667.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
proton-translocating NADH-quinone oxidoreductase subunit M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
UPI0003CEC3FF related cluster n=1 Tax=unknown RepID=UPI0003CEC3FF
scnpilot_solids2_trim150_scaffold_2374_curated_7
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6728..8713)
DNA (1986bp) protein (662aa)
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:ADV12419.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ADV12419.1};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TH94_MESCW
scnpilot_solids2_trim150_scaffold_2374_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8715..9023)
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NADH dehydrogenase subunit K; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRM5_9RHIZ
scnpilot_solids2_trim150_scaffold_2374_curated_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9023..9646)
DNA (624bp) protein (208aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FE33_9RHIZ
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:ESX69381.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
scnpilot_solids2_trim150_scaffold_2374_curated_10
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9778..9954)
DNA (177bp) protein (59aa)
NADH dehydrogenase subunit I (EC:1.6.5.3); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003D05796 related cluster n=1 Tax=unknown RepID=UPI0003D05796
Displaying 10 items

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