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scnpilot_solids2_trim150_scaffold_134_curated_29

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 25378..27828

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF56_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 818.0
  • Bit_score: 1359
  • Evalue 0.0
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KKB84613.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 816.0
  • Bit_score: 1461
  • Evalue 0.0
conjugal transfer protein TrbE; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 818.0
  • Bit_score: 1359
  • Evalue 0.0

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2451
ATGGTCGCGCTTCGCCAGTTCCGGGATACCAAACCGTCCTTCTCCGACCTGCTGCCCTATGCGGGCCTGGTCGATGATGGCGTGATCCTGTTGAAGGACGGCTCTCTGATGGCGGGCTGGTACTTCGCGGGGCCGGACAGCGAAAGCTCAACCAATATCGAGCGCAACGAGGTGTCGCGCCAGATCAATGCCATCCTCGGACGGCTAGGATCGGGCTGGATGGTCCAGGTCGAGGCGGTCCGCGTTCCGACGACGGCCTATCCCGCCCAGGAAGACTGCCGCTTCCCCGATCCCGTCACCCGCGCGATCGACGAGCAGCGGCGTGCGCATTTCATGGCGGAGAGGGGACATTATGAGAGCCAGCACGCCTTGATCCTGACCTACCGGCCTCCGGAGCCGCGGCGTTCGGCCATGGCCCGCTACGTCTATTCGGACGAGGCGAGCCGGACCGAGACCTATGCCGACGGCGTTCTGACCTCGTTCAAGGCATCGATCCGCGAGGTCGAACAATATCTCGGCAATGTGCTGTCGATCCGCCGCATGGTGACGCGGACTGTCACCGATCCGGAGTCTGGCGATGAAGCGCGATACGACGAGCTCTTCCAGTTCATTCGCTTCTGCATTGTCGGCGAAAGCCATCCGGTGCGCCTGCCGGCGATCCCGATGTATCTGGACTGGCTTGCAACGGCCGAGTTCCATCACGGCCTGTCGCCGATGGTCGATGGGCGGTTCCTCGCCGTGGTCGGGATCGACGGCTTCCCGGCCGAGAGCTGGCCGGGGATCCTCAACACGCTCGATCTGATGCCGCTGACCTATCGCTGGTCGAGCCGGTTTGTCTTCCTCGACGACCAGGAGGCCCGGCAGAAGCTCGAACGCACCCGGAAGAAGTGGCAGCAAAAGGTGCGGCCGTTCTTCGACCAGCTCTTCCAGACCCAGAGCCGCGCGGTCGATCAGGACGCGCTGACCATGGTCGCCGAAACCGAGGACGCCATCGCAGAGGCCTCGTCGCAATTGGTCGCCTATGGCTATTACACGCCGGTCATCATCATGTTCGATACCGATGACGCCCGGCTGCAGGACCAGGCCGAAGCGGTGCGGCGGCTGATCCAGGCCGAGGGCTTCGGGGCCCGCATCGAGACGCTGAACGCCACCGAGGCCTATCTCGGCAGCCTGCCGGGCAGCTGGTACGCCAATGTCCGCGAACCGCTGATCAATACCCGCAATCTCGCCGACCTCATTCCCGTCAATTCCGTCTGGGCTGGCAGTGCGACCGCGCCTTGCCCGTTCTATCCCCCCAATGCTCCGCCACTGATGCAGGTCGCCAGCGGCAGTTCTCCCTTCCGGCTGAACCTTCATGTCGACGATGTCGGCCACACGCTGATCTTCGGACCGACGGGGTCCGGCAAGTCGACCTTGCTTGCACTGATCGCGGCCCAGTTCCGGCGCTATGAGCACGCCCAGATCTTTGCCTTCGACAAGGGCAAGTCGCTCTACCCGCTCACGATTGCCGCCGGCGGCGACCATTACGAGATCGGGGCAGGGGAGGGGGAAGAAGCTCTTGCTTTCTGTCCGCTCGCCGAACTTGAGACGGAGGCAGACCGCGCATGGGCAAGCGAGTGGGTCGAGACGCTGATCGCCATTCAGGGCGTTTCGATTACCCCGGATCATCGCAACGCAATTGCGCGCCAGATCGGCTTGATGGCTTCGGCCCGCGGGCGCTCACTGTCCGACTTCGTCAGCGGTGTGCAGATGCGCGACATCAAGGACGCGCTTCAGCACTACACGGTTGACGGACCAATGGGACAGCTCCTGGACGCCGAGGAGGACGGATTGCACCTCGGAACCTTCCAGACCTTCGAGGTCGAGGAACTGATGAACATGGGCGAGCGCAATCTCGTACCCGTTCTTCTCTATCTGTTCCGCAGGATCGAAAAGCGCCTGACCGGAGCGCCGAGCCTGATCATTCTCGATGAGGCCTGGCTCATGCTTGGCCATCCGATGTTCCGCGACAAGATCAGGGAATGGCTGAAGGTGCTGCGCAAGGCGAACTGCGCCGTCATCATGGCCACGCAGTCGATCTCCGATGCCGAGCAGTCCGGCATCATCGACGTCCTGAAGGAAAGCTGCCTGACCAAGATCTGCCTGCCCAATGGCGCGGCGCGCGAGCCCGGCACCCGCGAGTTCTACGAACGCATCGGCTTCAACGAACGCCAGATCGAGATCGTCGCGACCGCGGTCCCGAAGCGCGAATATTATGTCGCCTCTCCGGAAGGTCGCCGCCTGTTCGACATGGCGCTTGGCCCGGTCGCGCTCGCCTTCGTCGGCGCGTCGTCCAAGGACAATCTGAAACGCATTGACGAGCTCCGGCAATCGCATGGTGCCGACTGGCCTCGCCATTGGCTCGAAGAAAGGGGAGTGGATGATGCCACACGCATTCTCACGCACAGCTAG
PROTEIN sequence
Length: 817
MVALRQFRDTKPSFSDLLPYAGLVDDGVILLKDGSLMAGWYFAGPDSESSTNIERNEVSRQINAILGRLGSGWMVQVEAVRVPTTAYPAQEDCRFPDPVTRAIDEQRRAHFMAERGHYESQHALILTYRPPEPRRSAMARYVYSDEASRTETYADGVLTSFKASIREVEQYLGNVLSIRRMVTRTVTDPESGDEARYDELFQFIRFCIVGESHPVRLPAIPMYLDWLATAEFHHGLSPMVDGRFLAVVGIDGFPAESWPGILNTLDLMPLTYRWSSRFVFLDDQEARQKLERTRKKWQQKVRPFFDQLFQTQSRAVDQDALTMVAETEDAIAEASSQLVAYGYYTPVIIMFDTDDARLQDQAEAVRRLIQAEGFGARIETLNATEAYLGSLPGSWYANVREPLINTRNLADLIPVNSVWAGSATAPCPFYPPNAPPLMQVASGSSPFRLNLHVDDVGHTLIFGPTGSGKSTLLALIAAQFRRYEHAQIFAFDKGKSLYPLTIAAGGDHYEIGAGEGEEALAFCPLAELETEADRAWASEWVETLIAIQGVSITPDHRNAIARQIGLMASARGRSLSDFVSGVQMRDIKDALQHYTVDGPMGQLLDAEEDGLHLGTFQTFEVEELMNMGERNLVPVLLYLFRRIEKRLTGAPSLIILDEAWLMLGHPMFRDKIREWLKVLRKANCAVIMATQSISDAEQSGIIDVLKESCLTKICLPNGAAREPGTREFYERIGFNERQIEIVATAVPKREYYVASPEGRRLFDMALGPVALAFVGASSKDNLKRIDELRQSHGADWPRHWLEERGVDDATRILTHS*