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scnpilot_solids2_trim150_scaffold_85_curated_33

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(47344..47841)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system lysozyme-like protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERG6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 159.0
  • Bit_score: 151
  • Evalue 5.70e-34
Type VI secretion system lysozyme-like protein {ECO:0000313|EMBL:EYR83976.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 159.0
  • Bit_score: 151
  • Evalue 7.90e-34
type VI secretion system lysozyme-like protein; K11897 type VI secretion system protein ImpF similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 148.0
  • Bit_score: 113
  • Evalue 9.20e-23

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGGACAGGAAACCCGCCAAAAGGCCCGTCATCCTCCCGATACTCGACAGGCTCCTGCAAGGAGACAATATCGAGATCGACGGCAATTTCGACCGCGCCATTCAAGTCCTGCGCGAATCCGTTCGGCGTGATCTCGAAATCCTTTTCAACACGCGGCCTTACTACCAGGCGATCCCGGGCGAATTCGGAGAACTGAAATCGTCGCTTCTCGCGTTCGGACTGCCCGATCTTCAGGTTCAGAACCTGACGGGCGCCTCGCAGCAGGAGGAATGCCGGCGCCGGATCGAGAATGCCATTCGGCGGTTCGAGCCCCGCTTGCGGGACGTTTCGGTGGAGATACTGGAAGACGACGCGCAGACGCGCGAGCGGACCCTGCGCTTCAGGATAGACGCCGTCATGGATGTCGCCGAGATGGCTGAAGCCGTCGTCTACGACACTTTCGTCGATCCAGTTTCCGGGGGCGTTCTGTTTGCCGGAGCCAAATCCGTGCTTTCATGA
PROTEIN sequence
Length: 166
VDRKPAKRPVILPILDRLLQGDNIEIDGNFDRAIQVLRESVRRDLEILFNTRPYYQAIPGEFGELKSSLLAFGLPDLQVQNLTGASQQEECRRRIENAIRRFEPRLRDVSVEILEDDAQTRERTLRFRIDAVMDVAEMAEAVVYDTFVDPVSGGVLFAGAKSVLS*