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scnpilot_solids2_trim150_scaffold_85_curated_37

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(51489..52607)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTW3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 377.0
  • Bit_score: 459
  • Evalue 2.80e-126
Type VI secretion-associated protein, ImpA family {ECO:0000313|EMBL:EYR83980.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 377.0
  • Bit_score: 459
  • Evalue 4.00e-126
impA-related N-terminal protein; K11902 type VI secretion system protein ImpA similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 372.0
  • Bit_score: 319
  • Evalue 1.90e-84

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGACGGGCCCGCAGGTTATCGATATCGCCGCGTTGCTGGAGCCGATCTCGGAGGAGGCGGCCGCCGGGACGGATTCGCGCGGCGACAAGCAATCGGACTCCCTCTATTACCGGGTCAAGGATGCCCGCAACGCCGCCCGTTCGGAGGAGCGCAGCGCCATCGAGACGGGAGCGGCCACGCCCGAGGAATGGAACACGGTCGTCTCCACGTCGATCGAATTGCTGACGACCGCGAGCAAGGATCTGGAGGTTGCCGCATGGCTGGTCGAGGGGTTGGTCCGCACGGAGGGATTCGCCGGGCTTCGCGATGGCCTGGCGGTGATTGCGGGCATCGTGCGCAACTATTGGGAGACGTGCTTCCCTGAACTCGATGAGGATGGCGTCGAAGGGAAGGTGACGGCGATCGCCGGCCTGAGCGGGTCGGGCGCGGTCGGGACGCTGATCCAGCCGATCCGGCTTCTGCCCATCACGCAAGGCGACATCGCGAGCTATTCGCTGTGGAGCTATGAGCAGGCCAGCGAGATACAGAAGATCACCGATCCCGCAAGGCGCCAGGCCCGCATAGAAGCGGGCGCCGTGCCGATGGACCAATTCATGCAAAGCGTGACGGAGACGCCGGCGACGATGTTCGCCGCGACCGTCGGGCTGATCGATGAGTGCCTTGCGGCGCTCGACGAGATGTCGTCCGCGTTCGACGCGGTTGCCGGTCGCGACGCGCCACCCGTGACGGCGCTGCGCGAATTGCTGCAACAGGCCGGCTCGTCCATCCGTTATTTCGCGGCCGACAAGCTTGCGCTCGTGGGCTCCGACGAGGCCGTTGCCATGGATGAGACGGCGCCTGCCGCAGAGAGCGGAGGAGCGTCCGCGCCGGCATCCGGCGGACCCCGCGTCGACGGCTACGCGTCGCGCAACGAGGCGCTCGGCGAACTGACGCGTCTTGCCGGCTTTTTCCGCAAGACCGAACCGCAATCACCCATTTCGTACACGCTGGAGGAAGCCATCCGGCGCGCTCGACTGACCTTGCCGGAACTTCTGGCCGAGCTTGCCGAGGATCCTGCCCACGTCCAGCGCATCCTGCTGGCCGCAGGCATCAAGAATCTCGAGGCCTCGTCCGAATAG
PROTEIN sequence
Length: 373
MTGPQVIDIAALLEPISEEAAAGTDSRGDKQSDSLYYRVKDARNAARSEERSAIETGAATPEEWNTVVSTSIELLTTASKDLEVAAWLVEGLVRTEGFAGLRDGLAVIAGIVRNYWETCFPELDEDGVEGKVTAIAGLSGSGAVGTLIQPIRLLPITQGDIASYSLWSYEQASEIQKITDPARRQARIEAGAVPMDQFMQSVTETPATMFAATVGLIDECLAALDEMSSAFDAVAGRDAPPVTALRELLQQAGSSIRYFAADKLALVGSDEAVAMDETAPAAESGGASAPASGGPRVDGYASRNEALGELTRLAGFFRKTEPQSPISYTLEEAIRRARLTLPELLAELAEDPAHVQRILLAAGIKNLEASSE*