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scnpilot_solids2_trim150_scaffold_33_curated_42

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 47292..47687

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 134.0
  • Bit_score: 219
  • Evalue 7.20e-55
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 134.0
  • Bit_score: 219
  • Evalue 3.20e-54
DNA-directed RNA polymerase subunit omega n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X0I0_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 134.0
  • Bit_score: 219
  • Evalue 2.30e-54

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGCCCGCGTCACCGTTGAAGACTGCATCGACAAGGTCGACAACCGCTTTGAACTGGTCCTGCTTGCAGGCCACCGTGCGCGTCTGCTTTCGCAGGGCGCGCCGCTGACGATCGACCGTGATAACGACAAGAACCCGGTCGTCGCGCTGCGCGAGATCGCCGACGAAATGCTGTCGCCGGGCGACCTCAAGGAAGATCTGATCCACTCGCTGCAGAAGCATGTCGAGATCGACGAGCCCGAAAGCGATGCGGCCGAGATCGCCGACCAGACCGAGGCCGCCGCCGGCGAGGCACAGAGCGAGGAAGAAGGCGTCACCTTCGACCGTATGTCGGAAGAGGAACTCCTTGCCGGCATCGAAGGCCTCGTGCCGCCGGAAAAGAGCGACGATTTCTGA
PROTEIN sequence
Length: 132
MARVTVEDCIDKVDNRFELVLLAGHRARLLSQGAPLTIDRDNDKNPVVALREIADEMLSPGDLKEDLIHSLQKHVEIDEPESDAAEIADQTEAAAGEAQSEEEGVTFDRMSEEELLAGIEGLVPPEKSDDF*