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scnpilot_solids2_trim150_scaffold_33_curated_130

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 143745..147248

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 999.99
  • Bit_score: 1841
  • Evalue 0.0
DEAD/DEAH box helicase; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 999.99
  • Bit_score: 1838
  • Evalue 0.0
UPI0003CEE2F4 related cluster n=1 Tax=unknown RepID=UPI0003CEE2F4 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 999.99
  • Bit_score: 1839
  • Evalue 0.0

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3504
ATGAAACTGATCGACGCAATCGGATTGAAGACCCGTGGCGCGGCGTCCGTGATCGTGGACGGCGTGGCCGACGGCTATGAGGCCTTCGCGCTTGCGGAAGCGGCGGCCGAGACGGCGCATGACGGGCCGCTGGTCTTCGTCGCCCGCGACGGCCAGCGCCTGCCTTCGCTGGTCGAGGCGCTCGCCTTCGTCGCGCCCGGGCTTCCAATCCTGCAACTTCCGGGATGGGACTGCCTGCCCTACGACCGCGTCTCGCCCGGCGCCGGCGTTTCGGCGCAGCGCCTGGAGGCGATGGCGGGGATGGCGGGGCTGAAGGCCAGGCCGCACCGGGCGCTGATCCTGACCACCGCCAACGCGCTCCTGCAATCGATGCCGCCGATGGAGGCGATCCAGGCGCAGGGTTTTTCCGCCCGTCCCGGTAACCAGGTCGACATGAACCAACTCGTCGAGCGGCTGGAGCGGAACGGCTTCGAGCGCGTGTCGACGGTGCGCGAGGTCGGCGAATATGCGGTGCGCGGCGGTATCCTCGATCTTTTCGCTCCGGGCAGTTCCGAGGCGCTGAGGCTCGATTTCTTCGGCGATACGCTGGAATCGATCCGCGCCTTCGACGTGGCTTCCCAGCGCACCACCGGCCAGCGCGACCGCATCGTGCTGGAGAGCATGAGCGAGGTGTCGCTGACGGAAGAGAATATCGCCCGCTTCCGCCGCCAGTATATCGAAGCGTTCGGCGCGCCTTCCCGCGACGACGCGCTCTATGCCGCGATCACCGAGGGAAGGCGCTTTGCCGGGATGGAGCACTGGCTGCCCCTTTTCCACGACCGACTGGAAACGCTTTTCGACTATCTGCCCGACACGCCCTTCGTCTTCGATCATCTGGCGCATGAAGCGCTTGCCGAGCGCCATGCGCTGGTTCTCGATCATTACGAGGCGCGCAGGGAGCAAGCGGGGGCCTCGCCGCTCGGCGAATCGGTTCCCTACAAGCCGGTCGCGCCGGAAAAGCTTTTCCTCTCTCCCGAAGCGGTGGCCGAGGCACTGAAGGCGCGCCTGTCGGTCGAATTCAGCCCGTTCGATGCGCCCGAAGCGTCGGACCGCAAGGTGCTTCACGCAGGAGCGAGGGCGGGGCGGTCCTTCGCCGAGGAGCGTGCCGATCCGTCGATCAACGTCTTTGCGCGCGCCGTCGACCATATCGGCAATCTGAGGGCCGCGAAGAAGCGCGTCATCGTCGCTGGCTGGAGCGAGGGTTCGCTCGACCGGCTCTCGCAGATCCTGGCCGAGCATAACCTTGGTAATGTGGGCCCGGTCGAAACGCTTGCCGCGTTGGACAAGCTGCCGCCGGAGCGTGTCGGGCTCGCGGTCCTGCCGCTGGAATCCGGTTTCGAGACGGAACAACTGGCGCTGGTCGCCGAGCAGGACATCCTCGGCGACCGGCTGATCCGCCGTGCCAAGCGCCGGAAGCGCGGCGCCGATTTCATCGCCGAGGTCGGCGCGCTCGCAGTCGGCGATATCGTGGTGCATGCGGACCACGGCATCGGCCGCTTCACCGGCCTGCGCACCATCGAGGCGGCCGGCGCGCCGCATGACTGCCTGGAAGTCCTCTATGCGGGCGACGACCGGCTGTTCCTGCCGGTCGAGAATATCGAGCTTCTGTCGCGCTTCGGCTCCGATTCCGAAGGCGTGATGCTCGACAAATTGGGCGGCGTCGCCTGGCAGTCGCGCAAGGCGAAGCTGAAGCGCCGCCTGCTGGAGATCGCCGGCCAGTTGATCCAAATCGCCGCGGAGCGCCAGATGCGCTCCGCGCCGAAGATGCTGCCGCCGCACGGCCTTTACGGCGAGTTCGCCGCGCGCTTTCCCTATGACGAGACCGACGACCAGCAGACTGCGATCGAGGCGGTGCAGGACGACCTCGCCGCCGGCAAGCCGATGGACCGGCTGATCTGCGGCGATGTCGGCTTCGGCAAGACGGAAGTGGCGCTGCGCGCGACCTTCCTCGCGGCCATGGACGGGTTCCAGGTCGCGGTGGTGGTGCCGACGACGCTGCTTGCACGCCAGCATTTCAAGACTTTCTCGCAGCGCTTCGCCGGCCTGCCGGTGAAGGTGCGCCAGGCCTCGCGCCTGGTCGGCTCGAAGGAATTGGCCGAAACGAAGAAGGGAATTGAAGACGGCACCGTCGATATCGTCGTCGGCACCCACGCTTTGCTCGGCAAGTCCATTTCCTTCAAGAATCTCGGCCTTCTCATCATCGACGAGGAGCAGCATTTCGGCGTCAAGCACAAGGAACGGCTGAAGGAACTGAAGAGCGAGGTGCATGTGCTGACGCTCTCTGCCACGCCGATCCCGCGCACGCTGCAACTGGCGCTGACGGGCGTGCGCGAATTGTCGCTCATCACCACGCCGCCAGTGGACCGCATGGCGGTGCGCACCTTTATCTCGCCTTTCGACGCGCTGGTGATCCGCGAGACACTTTTGCGCGAGCGCTATCGTGGCGGACAGAGCTTTTATGTCGTGCCACGGATTTCCGACCTCGCGGAAGTCCATGATTTCCTGTCGCGTTCCGTGCCCGAGTTGAAGGTCGCGGTGGCGCATGGGCAGCTTCCGGCCGGCGAACTCGACGACATCATGAACGCCTTCTATGACGGCCAGTACGATGTGCTGCTCTCGACCACCATCGTCGAATCCGGCCTCGACATCCCGACCGCCAACACGCTGATCGTACACCGGGCCGACATGTTCGGGCTGGCGCAGCTTTACCAGCTTCGCGGCCGGGTAGGGCGCTCCAAGCTGCGCGCCTATGCGCTGTTCACCTTGCCCGCCAAGCGCAAGCTTACCGGCATGGCGGAGCGGCGGCTGAAAGTGTTGCAGTCGCTCGACACGCTCGGGGCCGGCTTCCAGCTTGCCAGCCACGACCTCGACATACGCGGCGCCGGCAATCTCTTGGGCGAGGAACAGTCCGGCCATATCAAGGAGGTCGGCTTCGAGCTTTACCAGCAGATGCTGGAGGAAGCGGTGGCCGAGATACGCGGCTCGGACGAACCGACCGGGGCCGGCTGGTCGCCGCAGATCACCATCGGCACCGCCGTGATGATCCCGGAAAGCTACGTGCCCGACCTGCAACTCCGCATGGCGCTCTACCGGCGGCTGGCCGAGATCGAGAATACCGAGGATATCGACGCGTTCGGCGCCGAATTGATCGACCGCTTCGGCTCGCTGCCGCTGGAAGTCGAGCACCTCCTCAAGATCGTCTACATAAAGATCCTCTGCCATCGCGCCAATATCGAGAAGCTCGACGCCGGGCCGAAGGGCGTGGTCATCCATTTCCGCAACAAGGAGTTTTCCGACCCGGTGGCGCTGGTGCGCTTCATCGGCGAACAGGGCTCGCTGGCGAAGATCCGGCCCGACCAGAGCGTCGTCCTCGTACGCGACTGGCCGACGGCGGAAAAGCGGCTCTCCGGTTCGGCGGTCGTGGTGACGCAACTGGCGCGGCTTGCCGAAAAGGTCGCGGCCTGA
PROTEIN sequence
Length: 1168
MKLIDAIGLKTRGAASVIVDGVADGYEAFALAEAAAETAHDGPLVFVARDGQRLPSLVEALAFVAPGLPILQLPGWDCLPYDRVSPGAGVSAQRLEAMAGMAGLKARPHRALILTTANALLQSMPPMEAIQAQGFSARPGNQVDMNQLVERLERNGFERVSTVREVGEYAVRGGILDLFAPGSSEALRLDFFGDTLESIRAFDVASQRTTGQRDRIVLESMSEVSLTEENIARFRRQYIEAFGAPSRDDALYAAITEGRRFAGMEHWLPLFHDRLETLFDYLPDTPFVFDHLAHEALAERHALVLDHYEARREQAGASPLGESVPYKPVAPEKLFLSPEAVAEALKARLSVEFSPFDAPEASDRKVLHAGARAGRSFAEERADPSINVFARAVDHIGNLRAAKKRVIVAGWSEGSLDRLSQILAEHNLGNVGPVETLAALDKLPPERVGLAVLPLESGFETEQLALVAEQDILGDRLIRRAKRRKRGADFIAEVGALAVGDIVVHADHGIGRFTGLRTIEAAGAPHDCLEVLYAGDDRLFLPVENIELLSRFGSDSEGVMLDKLGGVAWQSRKAKLKRRLLEIAGQLIQIAAERQMRSAPKMLPPHGLYGEFAARFPYDETDDQQTAIEAVQDDLAAGKPMDRLICGDVGFGKTEVALRATFLAAMDGFQVAVVVPTTLLARQHFKTFSQRFAGLPVKVRQASRLVGSKELAETKKGIEDGTVDIVVGTHALLGKSISFKNLGLLIIDEEQHFGVKHKERLKELKSEVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFISPFDALVIRETLLRERYRGGQSFYVVPRISDLAEVHDFLSRSVPELKVAVAHGQLPAGELDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPAKRKLTGMAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEIRGSDEPTGAGWSPQITIGTAVMIPESYVPDLQLRMALYRRLAEIENTEDIDAFGAELIDRFGSLPLEVEHLLKIVYIKILCHRANIEKLDAGPKGVVIHFRNKEFSDPVALVRFIGEQGSLAKIRPDQSVVLVRDWPTAEKRLSGSAVVVTQLARLAEKVAA*