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scnpilot_solids2_trim150_scaffold_186_curated_13

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 13754..14443

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17CEB similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 228.0
  • Bit_score: 400
  • Evalue 9.70e-109
Chemotaxis protein CheY {ECO:0000313|EMBL:ESZ38527.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 228.0
  • Bit_score: 400
  • Evalue 1.40e-108
two component transcriptional regulator PhoB, winged helix family; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 228.0
  • Bit_score: 399
  • Evalue 5.20e-109

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Taxonomy

Mesorhizobium sp. L2C054A000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGATTGCGCCGAAAATCCTGGTGGTGGAGGACGAGGAATCGCTCTCGGTGCTCCTGCGCTACAATCTGGAGGCCGAAGGCTATCAGGTCGAGACGGTCATGCGCGGCGACGAGGCCGAGATCAGGCTGAGGGAGAACGTGCCGGACCTGCTGGTGCTCGACTGGATGCTGCCGGGCATCTCCGGCATCGAGCTTTGCCGCCGGCTTCGGATCAGGGCCGAGACCGAGCGCCTGCCGGTCATCATGCTGACGGCGCGCGGCGAGGAAAGCGACCGGGTCCGCGGTCTCTCTACCGGAGCCGACGACTACCTCGTCAAGCCGTTCTCGATGCCCGAATTCGTGGCCCGCGTGCGCGCGCTGCTCCGCCGCGCCAAGCCCGAGACGCTTTCAAACGTGCTCAAGGTCGGCGACATCGTGCTCGACCGCGAAACACATCGTGTCTATCGCGGGACGGTCGAGATCAGGCTCGGCCCGACCGAATTCCGCCTGCTCGAATTCCTCATGCGAACCCCCGGCCGCGTCTTCTCGCGCGGCCAGCTGCTGGACAATGTCTGGGGCGAGACGATCTATATCGATGAGCGCACGGTCGACGTTCATGTCGGACGCCTGCGCAAGGCGGTCAATGACGGCCGCATGCCGGACGTCATCCGCACCATCCGCGGCGCCGGCTATTCCATACAGGAAGCCTGA
PROTEIN sequence
Length: 230
MIAPKILVVEDEESLSVLLRYNLEAEGYQVETVMRGDEAEIRLRENVPDLLVLDWMLPGISGIELCRRLRIRAETERLPVIMLTARGEESDRVRGLSTGADDYLVKPFSMPEFVARVRALLRRAKPETLSNVLKVGDIVLDRETHRVYRGTVEIRLGPTEFRLLEFLMRTPGRVFSRGQLLDNVWGETIYIDERTVDVHVGRLRKAVNDGRMPDVIRTIRGAGYSIQEA*