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scnpilot_solids2_trim150_scaffold_186_curated

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_186_curated_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..63)
DNA (63bp) protein (21aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000347EC61
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ39140.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
extracellular solute-binding family protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_186_curated_2
unknown

Not on your lists

comp(129..1415)
DNA (1287bp) protein (429aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_186_curated_3
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1412..2539)
DNA (1128bp) protein (376aa)
ABC transporter; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20]
ABC transporter ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346DC43
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXL09213.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids2_trim150_scaffold_186_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2782..3327
DNA (546bp) protein (182aa)
HAD family hydrolase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JJ96_9RHIZ
Cyclic phosphodiesterase-like protein {ECO:0000313|EMBL:KFC70092.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HAD family hydrolase
scnpilot_solids2_trim150_scaffold_186_curated_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3324..4154
DNA (831bp) protein (277aa)
Inositol monophosphatase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJQ6_9RHIZ
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:EHH04566.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
scnpilot_solids2_trim150_scaffold_186_curated_6
unknown

Not on your lists

4147..4260
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_186_curated_7
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4331..8971
DNA (4641bp) protein (1547aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMB3_9RHIZ
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:KFB08863.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
PAS domain S-box
scnpilot_solids2_trim150_scaffold_186_curated_8
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9216..10268
DNA (1053bp) protein (351aa)
Phosphate ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGC5_9RHIZ
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
pstS; high-affinity phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_186_curated_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10343..11335
DNA (993bp) protein (331aa)
UPI0003CF5188 related cluster n=1 Tax=unknown RepID=UPI0003CF5188
Phosphate transporter permease subunit PstC {ECO:0000313|EMBL:ESW81092.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
phosphate ABC transporter, permease protein PstC
scnpilot_solids2_trim150_scaffold_186_curated_10
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11353..12204
DNA (852bp) protein (284aa)
Phosphate transporter permease subunit PtsA n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGU6_9RHIZ
Phosphate transporter permease subunit PtsA {ECO:0000313|EMBL:ESX68749.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
phosphate ABC transporter permease; K02038 phosphate transport system permease protein
scnpilot_solids2_trim150_scaffold_186_curated_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12201..13007
DNA (807bp) protein (269aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Phosphate ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFX3_9RHIZ
phosphate ABC transporter, ATP-binding protein
scnpilot_solids2_trim150_scaffold_186_curated_12
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13032..13736
DNA (705bp) protein (235aa)
UPI0003CF57F8 related cluster n=1 Tax=unknown RepID=UPI0003CF57F8
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
phosphate uptake regulatory protein PhoU; K02039 phosphate transport system protein
scnpilot_solids2_trim150_scaffold_186_curated_13
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13754..14443
DNA (690bp) protein (230aa)
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17CEB
Chemotaxis protein CheY {ECO:0000313|EMBL:ESZ38527.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
two component transcriptional regulator PhoB, winged helix family; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB
scnpilot_solids2_trim150_scaffold_186_curated_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14465..15709)
DNA (1245bp) protein (415aa)
Xyl repressor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMC0_9RHIZ
Xyl repressor {ECO:0000313|EMBL:EHK58134.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
xyl repressor
scnpilot_solids2_trim150_scaffold_186_curated_15
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15882..16925
DNA (1044bp) protein (348aa)
xylose ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EF75AA
Xylose ABC transporter substrate-binding protein {ECO:0000313|EMBL:EJZ19840.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
xylF; xylose ABC transporter substrate-binding protein; K10543 D-xylose transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_186_curated_16
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17035..18342
DNA (1308bp) protein (436aa)
sugar ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036D119D
ABC-type xylose transport system, permease component {ECO:0000313|EMBL:EJN00563.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
xylose transport permease xylH; K10544 D-xylose transport system permease protein
scnpilot_solids2_trim150_scaffold_186_curated_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18350..19141
DNA (792bp) protein (264aa)
ABC transporter; K10545 D-xylose transport system ATP-binding protein [EC:3.6.3.17]
sugar ABC transporter ATP-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D4AF99
ABC transporter {ECO:0000313|EMBL:EHK58137.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_186_curated_18
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19144..19308)
DNA (165bp) protein (55aa)
membrane protein n=1 Tax=Martelella mediterranea RepID=UPI0003610ADF
UPF0391 membrane protein TM49_11410 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_186_curated_19
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19429..19701)
DNA (273bp) protein (91aa)
17 kDa surface antigen n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F920_9RHIZ
17 kDa surface antigen {ECO:0000313|EMBL:EHS50785.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
17 kDa surface antigen
scnpilot_solids2_trim150_scaffold_186_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19946..20956)
DNA (1011bp) protein (337aa)
HWE histidine kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMC8_9RHIZ
HWE histidine kinase {ECO:0000313|EMBL:EHK58142.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_186_curated_21
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21129..21296)
DNA (168bp) protein (56aa)
UPF0391 membrane protein AZL_012590 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU18_AZOS1
hypothetical protein
UPF0391 membrane protein AZL_012590 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
scnpilot_solids2_trim150_scaffold_186_curated_22
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21475..22269)
DNA (795bp) protein (265aa)
UPI0003D05661 related cluster n=1 Tax=unknown RepID=UPI0003D05661
Chemotaxis protein CheY {ECO:0000313|EMBL:ESZ21921.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
response regulator receiver
scnpilot_solids2_trim150_scaffold_186_curated_23
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22480..22656
DNA (177bp) protein (59aa)
UPI0003CE785A related cluster n=1 Tax=unknown RepID=UPI0003CE785A
Uncharacterized protein {ECO:0000313|EMBL:ESY75359.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_186_curated_24
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22660..23208
DNA (549bp) protein (183aa)
RNA polymerase sigma factor n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F723A
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
RNA polymerase sigma factor, sigma-70 family
scnpilot_solids2_trim150_scaffold_186_curated_25
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23181..23582)
DNA (402bp) protein (134aa)
UPI0003CFE14A related cluster n=1 Tax=unknown RepID=UPI0003CFE14A
Histidine kinase {ECO:0000313|EMBL:ESZ26738.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
CheY-like receiver domain-containing protein
scnpilot_solids2_trim150_scaffold_186_curated_26
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23731..24486
DNA (756bp) protein (252aa)
UPI0003CF4470 related cluster n=1 Tax=unknown RepID=UPI0003CF4470
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:ESX69566.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_186_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24569..24907
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMD7_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58067.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_186_curated_28
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24914..25369
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKX3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV04982.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_186_curated_29
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25766..27229)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TL13_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10323.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_186_curated_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27509..27973)
DNA (465bp) protein (155aa)
Nuclease (SNase-like) protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLL2_9RHIZ
Nuclease (SNase-like) protein {ECO:0000313|EMBL:EHK58410.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
nuclease (SNase-like)
Displaying items 1-30 of 82 in total

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