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scnpilot_solids2_trim150_scaffold_186_curated_24

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 22660..23208

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F723A similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 181.0
  • Bit_score: 307
  • Evalue 6.80e-81
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 181.0
  • Bit_score: 302
  • Evalue 3.10e-79
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 178.0
  • Bit_score: 301
  • Evalue 2.00e-79

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Taxonomy

Mesorhizobium sp. LSHC422A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGGCGACCGCTTCGGGCTTCCGCGGCGATTTGTTGGCGGCCATTCCCAGCCTTCGCGCCTTCGCCGTCTCTCTCGCACAGAACGCCGACAAGGCGGACGACCTGGTGCAGGAGACGCTGGTGAAGGCGTGGGACAAGCAGAAGAGCTTCCAGCCGGGAACAAACCTCAAGGCCTGGCTCTTCACCATATTGCGCAACGAATTCTATTCGCAGATGCGCAAGCGGGGCCGCGAGGTGCAGGACAGCGACGGCACCATGACCGGCCGGCTTGCGGTCCATCCGAGCCAGGACGGCGCGCTCGACCTGCAGGATTTCCGCCGCGCGCTCACCCAATTGCCGGAAGACCAGCGCGAGGCGATCATCCTCATCGGCGCATCCGGGTTTTCATATGAAGAGGCCGCGGAAATCTGCGGTTGCGCCGTGGGCACGATCAAGAGCCGGGTCAGCCGGGGCAGGACGCGGCTTCAGGATCTGCTCGAAATATCGGGCGAAGGCGATTACGGCCCCGATTCGATCGCCGTTCAGGTATTGGGCTCCAATGTGACCTGA
PROTEIN sequence
Length: 183
MATASGFRGDLLAAIPSLRAFAVSLAQNADKADDLVQETLVKAWDKQKSFQPGTNLKAWLFTILRNEFYSQMRKRGREVQDSDGTMTGRLAVHPSQDGALDLQDFRRALTQLPEDQREAIILIGASGFSYEEAAEICGCAVGTIKSRVSRGRTRLQDLLEISGEGDYGPDSIAVQVLGSNVT*