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scnpilot_solids2_trim150_scaffold_1549_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1549_curated_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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71..754
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUV5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX13203.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1549_curated_2
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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901..1716
DNA (816bp) protein (272aa)
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50); K00878 hydroxyethylthiazole kinase [EC:2.7.1.50]
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB; 2198 / 1H9).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036DEC75
scnpilot_solids2_trim150_scaffold_1549_curated_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1709..2353
DNA (645bp) protein (215aa)
thiE; thiamine-phosphate pyrophosphorylase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000255|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000255|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000255|HAMAP-Rule:MF_00097};; Thiamine-phosphate pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00097}; Short=TMP pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00097};; Short=TMP-PPase {ECO:0000255|HAMAP-Rule:MF_00097};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;
Thiamine-phosphate synthase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=THIE_XANP2
scnpilot_solids2_trim150_scaffold_1549_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2445..4046
DNA (1602bp) protein (534aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
malate synthase; K01638 malate synthase [EC:2.3.3.9]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003663B23
scnpilot_solids2_trim150_scaffold_1549_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4300..5082
DNA (783bp) protein (261aa)
ABC transporter substrate-binding protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036AB814
Putative periplasmic ligand-binding sensor protein {ECO:0000313|EMBL:KFC64172.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
periplasmic ligand binding sensor protein
scnpilot_solids2_trim150_scaffold_1549_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5357..6154)
DNA (798bp) protein (266aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LYH0_METRJ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KFC64174.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_solids2_trim150_scaffold_1549_curated_7
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6370..7809)
DNA (1440bp) protein (480aa)
Membrane protein involved in the export of O-antigen and teichoic acid-like protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QWZ7_METTR
membrane protein
Membrane protein involved in the export of O-antigen and teichoic acid-like protein {ECO:0000313|EMBL:ACK51027.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scnpilot_solids2_trim150_scaffold_1549_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8205..8492
DNA (288bp) protein (96aa)
molecular chaperone GroES n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030153DE
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
chaperonin Cpn10; K04078 chaperonin GroES
scnpilot_solids2_trim150_scaffold_1549_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8553..10190
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QG66_METSZ
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
groL; 60 kDa chaperonin (GroEL protein)
scnpilot_solids2_trim150_scaffold_1549_curated_10
bacterium YEK0313, Bacteria

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10389..10787
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LHW2_PHOPR
Inner membrane protein YqjF {ECO:0000313|EMBL:CEJ15620.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein; K15977 putative oxidoreductase
scnpilot_solids2_trim150_scaffold_1549_curated_11
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10941..13025
DNA (2085bp) protein (695aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030B3801
Putative ABC transporter {ECO:0000313|EMBL:GAN46756.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
ABC transporter; K02471 putative ATP-binding cassette transporter
scnpilot_solids2_trim150_scaffold_1549_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13150..13581)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037A7706
META domain protein {ECO:0000313|EMBL:KFC73343.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1549_curated_13
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13633..14559)
DNA (927bp) protein (309aa)
hisG; ATP phosphoribosyltransferase; K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
ATP phosphoribosyltransferase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UL84_METS4
scnpilot_solids2_trim150_scaffold_1549_curated_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14583..14921)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003751EED
Bradyrhizobium elkanii strain UASWS1015 Contig162, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51953.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
livK; branched-chain amino acid ABC transporter substrate-binding protein LivK; K01999 branched-chain amino acid transport system substrate-binding protein
Displaying 14 items

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