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scnpilot_solids2_trim150_scaffold_2471_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2471_curated_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..325
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037CD19D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJX89155.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
scnpilot_solids2_trim150_scaffold_2471_curated_2
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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306..1640
DNA (1335bp) protein (445aa)
amide hydrolase; K01453 [EC:3.5.1.46]
6-aminohexanoate-dimer hydrolase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EA6
6-aminohexanoate hydrolase {ECO:0000313|EMBL:KGM50858.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
scnpilot_solids2_trim150_scaffold_2471_curated_3
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1906..2925
DNA (1020bp) protein (340aa)
UPI0003CECBC4 related cluster n=1 Tax=unknown RepID=UPI0003CECBC4
Alkanal monooxygenase {ECO:0000313|EMBL:ESW79223.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase
scnpilot_solids2_trim150_scaffold_2471_curated_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2938..3717)
DNA (780bp) protein (260aa)
Putative nucleoside-diphosphate-sugar epimerase dehydratase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q489_RHIE6
putative nucleoside-diphosphate-sugar epimerase dehydratase
Putative nucleoside-diphosphate-sugar epimerase dehydratase protein {ECO:0000313|EMBL:ACE94893.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
scnpilot_solids2_trim150_scaffold_2471_curated_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3861..5045)
DNA (1185bp) protein (395aa)
solA; N-methyltryptophan oxidase; K00301 sarcosine oxidase [EC:1.5.3.1]
Putative sarcosine oxidase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q487_RHIE6
Putative sarcosine oxidase protein {ECO:0000313|EMBL:ACE94891.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
scnpilot_solids2_trim150_scaffold_2471_curated_6
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5042..5971)
DNA (930bp) protein (310aa)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
5-dehydro-4-deoxyglucarate dehydratase; K01707 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M2A5_9PROT
scnpilot_solids2_trim150_scaffold_2471_curated_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6001..6777)
DNA (777bp) protein (259aa)
Putative transcriptional regulator protein, GntR family n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q486_RHIE6
putative GntR family transcriptional regulator
Putative transcriptional regulator protein, GntR family {ECO:0000313|EMBL:ACE94890.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
scnpilot_solids2_trim150_scaffold_2471_curated_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7099..8118
DNA (1020bp) protein (340aa)
Delta(1)-pyrroline-2-carboxylate reductase {ECO:0000303|PubMed:25608448}; Short=Pyr2C reductase {ECO:0000303|PubMed:25608448};; EC=1.5.1.49 {ECO:0000269|PubMed:25608448};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Malate/L-lactate dehydrogenase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0Y0_STAND
malate/L-lactate dehydrogenase
scnpilot_solids2_trim150_scaffold_2471_curated_9
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8321..8857)
DNA (537bp) protein (179aa)
Chromate transport protein ChrA n=1 Tax=Burkholderia sp. KJ006 RepID=I2DKL3_9BURK
Chromate transporter {ECO:0000313|EMBL:KHL08274.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
chromate transporter
scnpilot_solids2_trim150_scaffold_2471_curated_10
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8867..9538)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000379BB62
Chromate transport protein {ECO:0000313|EMBL:KCB44857.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
chromate transporter; K07240 chromate transporter
Displaying 10 items

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