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scnpilot_solids2_trim150_scaffold_1882_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1882_curated_1
bacterium YEK0313, Bacteria

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comp(1..174)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EKQ2_METSB
Uncharacterized protein {ECO:0000313|EMBL:CEJ12742.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1882_curated_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(235..942)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YLS9_9RHIZ
Putative phospholipid-binding domain protein {ECO:0000313|EMBL:AID30426.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1882_curated_3
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1062..1328)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036582BF
Uncharacterized protein {ECO:0000313|EMBL:KFG70486.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1882_curated_4
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1341..2339)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031329F0
WD-40 repeat-containing protein {ECO:0000313|EMBL:EIZ82075.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
WD-40 repeat-containing protein
scnpilot_solids2_trim150_scaffold_1882_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2339..3298)
DNA (960bp) protein (320aa)
Putative GTPase, G3E family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTK1_9RHIZ
Putative GTPase, G3E family {ECO:0000313|EMBL:EIM27293.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
cobalamin synthesis protein P47K
scnpilot_solids2_trim150_scaffold_1882_curated_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3395..4219)
DNA (825bp) protein (275aa)
zinc ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030D7D9A
ABC-type Mn2+/Zn2+ transport system, permease component {ECO:0000313|EMBL:EIM27295.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ABC transporter permease; K02075 zinc/manganese transport system permease protein
scnpilot_solids2_trim150_scaffold_1882_curated_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4261..5001)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2Y1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32753.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative ABC transporter ATP-binding protein
scnpilot_solids2_trim150_scaffold_1882_curated_8
unknown

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comp(5008..5142)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1882_curated_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5397..6554
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVF7_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55305.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1882_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6654..8243)
DNA (1590bp) protein (530aa)
Periplasmic glucans biosynthesis protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTK5_9RHIZ
Glucans biosynthesis protein G {ECO:0000313|EMBL:KFC74137.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
mdoD; glucan biosynthesis protein D; K03670 periplasmic glucans biosynthesis protein
scnpilot_solids2_trim150_scaffold_1882_curated_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8395..9342
DNA (948bp) protein (316aa)
C4-dicarboxylate ABC transporter n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035F9B02
putative TRAP-type uncharacterized transport system; K07080
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:EIG59596.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
scnpilot_solids2_trim150_scaffold_1882_curated_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9395..11509
DNA (2115bp) protein (705aa)
C4-dicarboxylate ABC transporter n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034C5582
TRAP transporter
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:ADU46260.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
scnpilot_solids2_trim150_scaffold_1882_curated_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11506..11892
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRZ4_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD09016.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
scnpilot_solids2_trim150_scaffold_1882_curated_14
unknown

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comp(11906..12121)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1882_curated_15
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12233..12427)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000367E0C4
high-affinity nickel-transporter; K08970 nickel/cobalt exporter
Putative high-affinity nickel-transporter {ECO:0000313|EMBL:ACS39154.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
Displaying 15 items

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