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scnpilot_solids2_trim150_scaffold_1410_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1410_curated_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1723
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E6381D
Uncharacterized protein {ECO:0000313|EMBL:KJC61179.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
branched chain amino acid ABC transporter ATPase/permease; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_1410_curated_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1704..2450
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFU8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83346.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
branched-chain amino acid ABC transporter, ATP-binding protein
scnpilot_solids2_trim150_scaffold_1410_curated_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2618..4111
DNA (1494bp) protein (498aa)
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z303_9RHIZ
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIM30595.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
major facilitator transporter
scnpilot_solids2_trim150_scaffold_1410_curated_4
bacterium YEK0313, Bacteria

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comp(4118..5056)
DNA (939bp) protein (313aa)
gluconolactonase; K01053 gluconolactonase [EC:3.1.1.17]
gluconolactonase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000375A167
Gluconolactonase {ECO:0000313|EMBL:CEJ13397.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_1410_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5307..5819
DNA (513bp) protein (171aa)
Transcriptional regulator n=2 Tax=Rhizobium leguminosarum bv. viciae RepID=J0V4E3_RHILV
MarR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EJC67808.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
scnpilot_solids2_trim150_scaffold_1410_curated_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5800..7101
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UCP8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11131.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
protein secretion protein; K03543 multidrug resistance protein A
scnpilot_solids2_trim150_scaffold_1410_curated_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7107..8642
DNA (1536bp) protein (512aa)
DSBA oxidoreductase n=1 Tax=Rhizobium loti RepID=UPI00037F25F2
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:CDX46402.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
drug resistance transporter, EmrB/QacA subfamily
scnpilot_solids2_trim150_scaffold_1410_curated_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8718..9881
DNA (1164bp) protein (388aa)
amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
amidohydrolase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FD0B01
Amidohydrolase {ECO:0000313|EMBL:EKS42729.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
scnpilot_solids2_trim150_scaffold_1410_curated_9
bacterium YEK0313, Bacteria

Not on your lists

9942..10418
DNA (477bp) protein (159aa)
UPI0003CF856E related cluster n=1 Tax=unknown RepID=UPI0003CF856E
Uncharacterized protein {ECO:0000313|EMBL:CEJ15199.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1410_curated_10
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10480..11271)
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U7K0_METS4
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACA16222.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_1410_curated_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11428..12651
DNA (1224bp) protein (408aa)
Blr6249 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GU6_BRADU
Allantoate amidohydrolase {ECO:0000313|EMBL:KJC35491.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
allantoate amidohydrolase
scnpilot_solids2_trim150_scaffold_1410_curated_12
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12648..14750)
DNA (2103bp) protein (701aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030E7E62
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ACL61188.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids2_trim150_scaffold_1410_curated_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14886..16739
DNA (1854bp) protein (618aa)
Dihydroxy-acid dehydratase {ECO:0000255|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000255|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000255|HAMAP-Rule:MF_00012};; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=ILVD_AZOC5
scnpilot_solids2_trim150_scaffold_1410_curated_14
bacterium YEK0313, Bacteria

Not on your lists

17008..18801
DNA (1794bp) protein (598aa)
ABC transporter peptide-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMZ6_9PROT
Oligopeptide-binding protein AppA {ECO:0000313|EMBL:CEJ15298.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
peptide ABC transporter substrate-binding protein
scnpilot_solids2_trim150_scaffold_1410_curated_15
bacterium YEK0313, Bacteria

Not on your lists

18841..19800
DNA (960bp) protein (320aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM10_METNO
Glutathione transport system permease protein GsiC {ECO:0000313|EMBL:CEJ15297.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_1410_curated_16
bacterium YEK0313, Bacteria

Not on your lists

19766..20701
DNA (936bp) protein (312aa)
Peptide ABC transporter membrane protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JAG9_9PROT
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:CEJ15296.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
oppC; oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_1410_curated_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20728..21270
DNA (543bp) protein (181aa)
NAD-binding 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Nitratireductor indicus C115 RepID=K2NTP0_9RHIZ
NAD-binding 3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EKF42645.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hydroxlacyl-CoA dehydrogenase
Displaying 17 items

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