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scnpilot_solids2_trim150_scaffold_1044_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1044_curated_1
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

600..1325
DNA (726bp) protein (242aa)
hypothetical protein, partial n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000361012B
Uncharacterized protein {ECO:0000313|EMBL:EDS99871.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria IOP40-10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1044_curated_2
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2712..3434)
DNA (723bp) protein (241aa)
Putative esterase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDD0_METNO
putative esterase
Putative esterase {ECO:0000313|EMBL:ACL61296.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids2_trim150_scaffold_1044_curated_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3605..5380)
DNA (1776bp) protein (592aa)
Chloride channel protein EriC n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLL1_9RHIZ
Chloride channel protein EriC {ECO:0000313|EMBL:EIM24853.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
chloride channel protein; K03281 chloride channel protein, CIC family
scnpilot_solids2_trim150_scaffold_1044_curated_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5661..6086
DNA (426bp) protein (142aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TW13_ACIAC
3-demethylubiquinone-9 3-methyltransferase; K04750 PhnB protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
scnpilot_solids2_trim150_scaffold_1044_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6107..6532)
DNA (426bp) protein (142aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z307_9RHIZ
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein
scnpilot_solids2_trim150_scaffold_1044_curated_6
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6683..7252)
DNA (570bp) protein (190aa)
Flagellar assembly protein flix n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WRG3_9RHIZ
Flagellar assembly protein flix {ECO:0000313|EMBL:EIZ82938.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1044_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7365..8507
DNA (1143bp) protein (381aa)
flagellar basal body P-ring protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00036B1103
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI
scnpilot_solids2_trim150_scaffold_1044_curated_8
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8507..8827
DNA (321bp) protein (107aa)
flagellar protein FlgJ n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037731ED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA18538.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_1044_curated_9
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8824..9306
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IEJ7_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL59569.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids2_trim150_scaffold_1044_curated_10
unknown

Not on your lists

9492..9875
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1044_curated_11
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10019..10384
DNA (366bp) protein (122aa)
Flagellar FlaF n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T0D2_9BRAD
Flagellar FlaF {ECO:0000313|EMBL:CCD99909.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
flaF; flagellar FlaF
scnpilot_solids2_trim150_scaffold_1044_curated_12
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10616..11809)
DNA (1194bp) protein (398aa)
Flagellin domain protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KDW0_METEX
Flagellin domain protein {ECO:0000313|EMBL:EHP94265.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1044_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12005..12403
DNA (399bp) protein (133aa)
Flagellum biosynthesis repressor protein FlbT n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CMM9_9RHOB
Flagellar protein FlbT {ECO:0000313|EMBL:KFC67127.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K06601 flagellar protein FlbT
scnpilot_solids2_trim150_scaffold_1044_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12650..14155)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW70_PARL1
Uncharacterized protein {ECO:0000313|EMBL:KFC67125.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1044_curated_15
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14166..16016)
DNA (1851bp) protein (617aa)
Flagellar hook-associated protein FlgK n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ITR5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig179, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47691.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
flagellar hook-associated protein; K02396 flagellar hook-associated protein 1 FlgK
scnpilot_solids2_trim150_scaffold_1044_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16042..17382)
DNA (1341bp) protein (447aa)
Flagellar basal body FlaE domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IB71_METNO
Putative flagellar hook protein FlgE {ECO:0000313|EMBL:KFC67123.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
flagellar basal body FlaE domain-containing protein; K02390 flagellar hook protein FlgE
scnpilot_solids2_trim150_scaffold_1044_curated_17
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17551..18582)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035D62D3
hypothetical protein; K08990 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:GAN48602.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
scnpilot_solids2_trim150_scaffold_1044_curated_18
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18579..20030)
DNA (1452bp) protein (484aa)
ATP/GTP-binding protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000370CA13
Amino acid regulated cytosolic protein {ECO:0000313|EMBL:ESR26755.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein; K06918
scnpilot_solids2_trim150_scaffold_1044_curated_19
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20130..20768)
DNA (639bp) protein (213aa)
putative phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Phosphohistidine phosphatase SixA n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2Z6_9RHIZ
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EIM30588.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Displaying 19 items

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