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scnpilot_solids2_trim150_scaffold_484_curated_28

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(29818..30606)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Methylocystis parvus RepID=UPI00031620C0 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 265.0
  • Bit_score: 332
  • Evalue 2.80e-88
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:KFC70893.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 270.0
  • Bit_score: 358
  • Evalue 6.80e-96
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 263.0
  • Bit_score: 324
  • Evalue 3.20e-86

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGACTGTCGCCAAGGATATCGCGCCGCATTTGCCGTATCTCAGGCGTTTCGCGCGTGCATTGAGCGGGAGCCAGAACAGCGGCGATGCCTATGTCGTGGCAACGCTCGAGACGCTGGTTGCCAATCCGAACGTGTTCGAACGTGAGCTTGCGCCCCGGGTGGCGCTCTACAAGCTGTTCGTCGCCTTGTGGTCGTCGGTGCCGCTCAATGACGGCGAGGGCGCCGGGCGGCAGCCGGCGGTCGAGCGCAATCTCGAGGCGTTGACGCCGCGGCCCCGGCAGGCCTTCCTGCTCAAGACGGTGGAAGGGTTCTCGAGCGAGGATGTGGCGACGATCATGGAGGTCGCGCCGGAGCGGATTTCGGCGCTGCTCGCGGCGGCCGGCAAGGAGATCGCCGAGCAGGTCGCGACCGATGTGATGATCATCGAGGACGAGCCGGTGATCGCGCTCGATCTCGAGGCGCTCGTGTGCGAGCTCGGCCACAGCGTGACCGGCATCGCGCGCACGCATCGCGAGGCGGTGGCGCTGGCGCAGGACAAGCGGCCCGGCCTGATCCTCGCCGATATCCAGCTCGCCGACGGCAGTTCCGGCCTGGAGGCGGTCAACGAAATCCTCACCAAATTCGACGTGCCGATCATCTTCATCACCGCCTATCCGGAGCGGCTGCTGACCGGCGAACGGCCGGAGCCGGCCTTCCTGATCACCAAGCCGTTCCAGCCCGACATCGTGCGGGCGACGGTGAGCCAGGCGCTGTTCTTCGATAGCAAATCCGCGATGCGCGCCGCCTGA
PROTEIN sequence
Length: 263
MTVAKDIAPHLPYLRRFARALSGSQNSGDAYVVATLETLVANPNVFERELAPRVALYKLFVALWSSVPLNDGEGAGRQPAVERNLEALTPRPRQAFLLKTVEGFSSEDVATIMEVAPERISALLAAAGKEIAEQVATDVMIIEDEPVIALDLEALVCELGHSVTGIARTHREAVALAQDKRPGLILADIQLADGSSGLEAVNEILTKFDVPIIFITAYPERLLTGERPEPAFLITKPFQPDIVRATVSQALFFDSKSAMRAA*