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scnpilot_solids2_trim150_scaffold_1704_curated_7

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(3236..4105)

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Pseudomonas putida CSV86 RepID=L1LSS6_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 254.0
  • Bit_score: 199
  • Evalue 5.40e-48
IclR family transcriptional regulator {ECO:0000313|EMBL:EKX82002.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 254.0
  • Bit_score: 199
  • Evalue 7.60e-48
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 267.0
  • Bit_score: 168
  • Evalue 3.20e-39

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGCCAGCGCCAATGCCGATGTCGCGGAACGGGAAGGTGGGGATGTCAGGCCAAGAAAGCCCGCCAGGCGAAAAAGCCGCTTCTGGCGTGAAATCCGTCCAGGTCGCCCTGAATGTGCTCGAGGCGGTCGCGGCCGCCCCTGAACCGGTCAGCGTCACCGAGATCGCGCGCCAACTCGGCCTGACCAAGCCGTCGGTGTTTCGCCACCTCAAGACGCTCGTCGAGCACCACATGCTCAACCAGGACCCGAATACGGCGCGCTACACGCTCGGGGTCCGGTTGCACGTGCTGGGGCAAATGGCCTCGAATCGCATCGATATTCTCAAGATATCGGATCCGATCATGCGCCAGTTGCGCGATGACACCGGCATGACGATCAACCTCGCCGGCTTCCTGCAGGACAGGACGGTGATTCTGCGCTCGGCGCTCGGCCCTTCGGCGATCGAGCTCTCGGTCAGGATCGGCACGGAATACCCGTTTCACGCCACGTCACAGGGCATCATCGCCCTGGCTTTCGGACGCCCCGAGCGGATGGCCGCCATGCGCAAGCGCGGCTTGCAACGCATTACCGATCACACCGTCACCGATTTGGGCGATCTCACGCGCGACATCGCCGAGGCGCGCCTGCGCGGCTGGTCGATGGTGTTCGAGCACACCATCCTCGGCGTCGCCGCCGCCTCGGTGCCGATTTTCGACGCGACCGGTGACAGCATCGCCGCGATCAGCCTGATCGGCACGCCGCAACTCTTCGTGACCGAGAACGGCGCGCCGCCGCATCTGGCCGTGCTCAGACAGGCCGGCGAGAAAATGTCGGCGCAACTCGGTTTCCGAGGGCGCTATCCCGTGGGTGACAATCCATCGGGCGCCTGA
PROTEIN sequence
Length: 290
MPAPMPMSRNGKVGMSGQESPPGEKAASGVKSVQVALNVLEAVAAAPEPVSVTEIARQLGLTKPSVFRHLKTLVEHHMLNQDPNTARYTLGVRLHVLGQMASNRIDILKISDPIMRQLRDDTGMTINLAGFLQDRTVILRSALGPSAIELSVRIGTEYPFHATSQGIIALAFGRPERMAAMRKRGLQRITDHTVTDLGDLTRDIAEARLRGWSMVFEHTILGVAAASVPIFDATGDSIAAISLIGTPQLFVTENGAPPHLAVLRQAGEKMSAQLGFRGRYPVGDNPSGA*