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scnpilot_solids2_trim150_scaffold_960_curated_12

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(12991..14019)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 326.0
  • Bit_score: 420
  • Evalue 1.90e-114
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 334.0
  • Bit_score: 404
  • Evalue 3.10e-110
Pseudouridine synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUE3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 326.0
  • Bit_score: 420
  • Evalue 1.30e-114

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGACGCCCGACGACATCGCCGCTCCGCCAGACCCGCGCTCGCACCTGCTGCATGCAGATGATGCCGCCCAGCGCCTCGACAAGTTCATCGCCGATGCCATCGCCGACGCGACGCTGTCGCGCACGCGCATCAAGGCCCTGATCCTCGACGGTTTCGTCACCGTCGCCGACGGCATCTGCCGCGATCCGGCGCGCAAGCTCAAAGCGGGCCAGCAGGTCGTGATCACGCTGCCCGAGCCGGTCGCCGCCGAACCGGCCGGCGAGGCGATCCCGCTTGCCATCCGTTATGAGGACGCCCACCTCATCGTCATCGACAAGCCGGCCGGCATGGTGGTGCACCCCGCCGCCGGACATGCCAGCGGCACGCTGGTTAACGCCCTGATCGGCCATTGCGGCGACAGCCTGTCCGGCATTGGCGGCGTGAAGCGGCCGGGCATCGTGCACCGGCTCGACAAGGATACGTCCGGGCTGATGGTGGTCGCCAAGACCGACGCCGCCCACCGTCACCTCGCGGCACAATTCGCCGATCACGGCCGCACCGGTGCGCTGATGCGCGCCTATCTGGCGCTGGTCTGGGGCGATCTGGCGCGCCGGCAGGGCACGATCGAGGCCAATCTCGAGCGCAGCTCCGCCAATCGCGAGAAAATGGCTGTCGTCGATGAGGATCACGGTCGTTTCGCCCTCACCCATTACACGGTGGAGGAAACCTTCGCCGGCGTCTCCGGCGGCGCCACCGTCGCCAGCCTGCTGCGCTGCGAGCTGGAAACCGGGCGGACGCACCAGATCCGCGTGCACATGACGCATCTTGGCCATCCGCTGCTCGGCGACGCCGTTTATGGCGGCGGCTTCAAGACCAAGGCCGCCCTGCTCTCCCCCCCGGCGCAACAGGCGTTGGCGGCGTTGGGACGCCAGGCCCTGCACGCCACGCTGCTCGGCTTCGAGCACCCCGAGACCGGCGAGGTCCTGAGCTTTGAATCCGCGCCGCCGGCCGACATGGCGCGGCTGATGGCGGCGCTGCGACACCCCTGA
PROTEIN sequence
Length: 343
MTPDDIAAPPDPRSHLLHADDAAQRLDKFIADAIADATLSRTRIKALILDGFVTVADGICRDPARKLKAGQQVVITLPEPVAAEPAGEAIPLAIRYEDAHLIVIDKPAGMVVHPAAGHASGTLVNALIGHCGDSLSGIGGVKRPGIVHRLDKDTSGLMVVAKTDAAHRHLAAQFADHGRTGALMRAYLALVWGDLARRQGTIEANLERSSANREKMAVVDEDHGRFALTHYTVEETFAGVSGGATVASLLRCELETGRTHQIRVHMTHLGHPLLGDAVYGGGFKTKAALLSPPAQQALAALGRQALHATLLGFEHPETGEVLSFESAPPADMARLMAALRHP*