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scnpilot_solids2_trim150_scaffold_1108_curated_12

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(9020..9592)

Top 3 Functional Annotations

Value Algorithm Source
2',5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 177.0
  • Bit_score: 238
  • Evalue 2.20e-60
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 177.0
  • Bit_score: 238
  • Evalue 9.70e-60
2',5' RNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQR0_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 177.0
  • Bit_score: 238
  • Evalue 6.90e-60

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCCACGTCTTTTCACCGCTTTGGAACTCCCAGCCGATGTCGGATTTTCCCTGTCCATGCTGCGCGGCGGCCTGCCGGGCGCGCGCTGGATCGACCGGGAAAACTACCACATCACCTTGCGTTTCATCGGCGATGTCGACGAGCGCACCGCCGACGCCGTCGACGAGATGCTGCTCGAGGTAGAGCGCGAGCCGATCCCGATCCGGCTCAACGGTCTCGGCTCGTTCGGCTCGGACAAGCCGCGCTCGATCCATGCCGCGATCGAGCCGTCGCGGGCGCTGAGCGCCCTGCAGGGCGATATCGAGCGCGCCATAAGGCGTCTCGGCCTGCCGCCCGAGACGCGCAAATTCGTGCCGCATGTCTCGCTGGCGCGCCTGCGCCATGCCTCGACGCTCGATGTCGCCGATTATCTGGCGATGCGCGGCTATTTCCCGCCGCGCAGCTTCACGGCCGCGCGCTTCGTGCTGTTTTCCTCGCGCGATTCGGTCGGCGGCGGACCCTATGTGCTGGAAGCCGCCTATCCGCTCGGGCAGCACGAAATGCCGGCCTGGCCGGCGCGGCGCTGGGGGTGA
PROTEIN sequence
Length: 191
MPRLFTALELPADVGFSLSMLRGGLPGARWIDRENYHITLRFIGDVDERTADAVDEMLLEVEREPIPIRLNGLGSFGSDKPRSIHAAIEPSRALSALQGDIERAIRRLGLPPETRKFVPHVSLARLRHASTLDVADYLAMRGYFPPRSFTAARFVLFSSRDSVGGGPYVLEAAYPLGQHEMPAWPARRWG*