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scnpilot_solids2_trim150_scaffold_1759_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1759_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..352)
DNA (351bp) protein (117aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NU85_9GAMM
carbohydrate ABC transporter membrane protein 2, CUT1 family
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:AGG90981.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1759_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(349..1227)
DNA (879bp) protein (293aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB6_9GAMM
carbohydrate ABC transporter membrane protein 1, CUT1 family
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:AGG90980.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1759_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1224..2399)
DNA (1176bp) protein (392aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC38_9GAMM
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EIL97029.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
scnpilot_solids2_trim150_scaffold_1759_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2501..3994)
DNA (1494bp) protein (498aa)
Tat pathway signal protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003493E52
Uncharacterized protein {ECO:0000313|EMBL:EIL97030.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1759_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4059..5642)
DNA (1584bp) protein (528aa)
tryptophan halogenase; K14266 FADH2 O2-dependent halogenase I [EC:1.14.14.7]
Tryptophan halogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC40_9GAMM
Tryptophan halogenase {ECO:0000313|EMBL:EIL97031.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_1759_curated_6
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5683..8730)
DNA (3048bp) protein (1016aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00035F80E0
Membrane protein {ECO:0000313|EMBL:AIF46207.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
TonB-dependent outer membrane receptor
scnpilot_solids2_trim150_scaffold_1759_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8763..9782)
DNA (1020bp) protein (340aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC42_9GAMM
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL97033.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_1759_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10354..10809
DNA (456bp) protein (152aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC1_9GAMM
membrane protease subunit, stomatin/prohibitin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1759_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10967..11596
DNA (630bp) protein (210aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC44_9GAMM
scnpilot_solids2_trim150_scaffold_1759_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11744..13099)
DNA (1356bp) protein (452aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Beta-galactosidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMY0_9GAMM
beta-galactosidase
scnpilot_solids2_trim150_scaffold_1759_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13308..14459
DNA (1152bp) protein (384aa)
Multiple sugar ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC4_9GAMM
carbohydrate ABC transporter ATP-binding protein, CUT1 family
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGG90972.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1759_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14583..15182
DNA (600bp) protein (200aa)
ATPase involved in chromosome partitioning n=1 Tax=Rhodanobacter denitrificans RepID=M4NU78_9GAMM
ATPase involved in chromosome partitioning
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGG90971.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 12 items

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