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scnpilot_solids2_trim150_scaffold_2118_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2118_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..249)
DNA (249bp) protein (83aa)
Class III aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H5_9GAMM
Class III aminotransferase {ECO:0000313|EMBL:EIL94716.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
4-aminobutyrate aminotransferase family protein
scnpilot_solids2_trim150_scaffold_2118_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(301..999)
DNA (699bp) protein (233aa)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphatephosphatase related protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNU1_9GAMM
haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase
Haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000313|EMBL:AGG88240.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2118_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1166..1789
DNA (624bp) protein (208aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H3_9GAMM
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EIL94714.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAP2 superfamily protein
scnpilot_solids2_trim150_scaffold_2118_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1786..3231
DNA (1446bp) protein (482aa)
Outer membrane efflux protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H2_9GAMM
Outer membrane efflux protein {ECO:0000313|EMBL:EIL94713.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane protein
scnpilot_solids2_trim150_scaffold_2118_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3228..4295
DNA (1068bp) protein (356aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H1_9GAMM
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL94712.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_2118_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4292..7363
DNA (3072bp) protein (1024aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H0_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL94711.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation/multidrug efflux pump
scnpilot_solids2_trim150_scaffold_2118_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7395..8432
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94710.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2118_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8478..9668)
DNA (1191bp) protein (397aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G8_9GAMM
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL94709.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ADP-heptose:LPS heptosyltransferase
scnpilot_solids2_trim150_scaffold_2118_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9878..10186)
DNA (309bp) protein (103aa)
Peptidase propeptide domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFK8_9GAMM
Peptidase propeptide domain-containing protein
Peptidase propeptide domain-containing protein {ECO:0000313|EMBL:AGG88837.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2118_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10564..11709)
DNA (1146bp) protein (382aa)
Glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN3_9GAMM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87535.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2118_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11706..12518)
DNA (813bp) protein (271aa)
Polysaccharide deacetylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN4_9GAMM
putative xylanase/chitin deacetylase
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:AGG87536.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2118_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12593..13987)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G7_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_2118_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13984..14091)
DNA (108bp) protein (36aa)
Two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G6_9GAMM
Two component transcriptional regulator {ECO:0000313|EMBL:EIL94707.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Displaying 13 items

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