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scnpilot_solids2_trim150_scaffold_5188_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5188_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..999)
DNA (999bp) protein (333aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK8_9GAMM
scnpilot_solids2_trim150_scaffold_5188_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1287..2942
DNA (1656bp) protein (552aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Two-component system, sensor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAP5_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_5188_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2961..3965)
DNA (1005bp) protein (335aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NEC4_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG87863.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5188_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4211..6661
DNA (2451bp) protein (817aa)
Beta-phosphoglucomutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZJ2_9GAMM
Beta-phosphoglucomutase {ECO:0000313|EMBL:AGG87862.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
beta-phosphoglucomutase
scnpilot_solids2_trim150_scaffold_5188_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6628..7173
DNA (546bp) protein (182aa)
Beta-phosphoglucomutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAP7_9GAMM
Beta-phosphoglucomutase {ECO:0000313|EMBL:EIL96538.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
beta-phosphoglucomutase
scnpilot_solids2_trim150_scaffold_5188_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7247..9790
DNA (2544bp) protein (848aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ82_9GAMM
Outer membrane receptor protein {ECO:0000313|EMBL:AGG87861.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane receptor protein
scnpilot_solids2_trim150_scaffold_5188_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9893..11182
DNA (1290bp) protein (430aa)
Fucose permease n=1 Tax=Rhodanobacter denitrificans RepID=M4NB64_9GAMM
fucose permease
Fucose permease {ECO:0000313|EMBL:AGG87860.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5188_curated_8
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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11179..13431
DNA (2253bp) protein (751aa)
Trehalose/maltose hydrolase or phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB95_9GAMM
trehalose/maltose hydrolase or phosphorylase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids2_trim150_scaffold_5188_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13549..14181
DNA (633bp) protein (211aa)
Fis family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXG9_9GAMM
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 9 items

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