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scnpilot_solids2_trim150_scaffold_2560_curated

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2560_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..685)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ63_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90285.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2560_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(804..1802)
DNA (999bp) protein (333aa)
ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ64_9GAMM
MoxR-like ATPase
MoxR-like ATPase {ECO:0000313|EMBL:AGG90286.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2560_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1799..2914)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7K2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95443.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2560_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2911..4443)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=3 Tax=Rhodanobacter denitrificans RepID=M4NKS8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90288.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2560_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4433..5410)
DNA (978bp) protein (326aa)
Uncharacterized membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKM2_9GAMM
uncharacterized membrane protein
Uncharacterized membrane protein {ECO:0000313|EMBL:AGG90289.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2560_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5407..6087)
DNA (681bp) protein (227aa)
RDD domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSH3_9GAMM
RDD domain-containing protein {ECO:0000313|EMBL:EIM02415.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative membrane protein/domain protein
scnpilot_solids2_trim150_scaffold_2560_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6101..6619)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSH2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02414.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative membrane protein/domain protein
scnpilot_solids2_trim150_scaffold_2560_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6701..7168)
DNA (468bp) protein (156aa)
SET domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7K7_9GAMM
SET domain-containing protein {ECO:0000313|EMBL:EIL95448.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SET domain-containing protein
scnpilot_solids2_trim150_scaffold_2560_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7350..7826
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90293.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2560_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7850..9640
DNA (1791bp) protein (597aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7K9_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIL95450.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA dehydrogenase
scnpilot_solids2_trim150_scaffold_2560_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9746..11464)
DNA (1719bp) protein (573aa)
Transcriptional regulator domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH96_9GAMM
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:EIL98837.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
TPR repeat-containing serine/threonin protein kinase
scnpilot_solids2_trim150_scaffold_2560_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11606..12127
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH97_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98838.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2560_curated_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12202..12492
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY32_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2560_curated_14
unknown

Not on your lists

comp(12604..12855)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2560_curated_15
unknown

Not on your lists

comp(13011..13238)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2560_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13240..15474)
DNA (2235bp) protein (745aa)
Protein kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL33_9GAMM
Protein kinase {ECO:0000313|EMBL:EIM00175.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein kinase
scnpilot_solids2_trim150_scaffold_2560_curated_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15614..16267
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL34_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00176.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2560_curated_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16375..17409
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VV96_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91137.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2560_curated_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17623..18222
DNA (600bp) protein (200aa)
Putative outer membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WMQ3_9GAMM
Putative outer membrane protein {ECO:0000313|EMBL:EIM00745.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative outer membrane protein
scnpilot_solids2_trim150_scaffold_2560_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18405..19844)
DNA (1440bp) protein (480aa)
Exoribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NJL6_9GAMM
exoribonuclease R
Exoribonuclease R {ECO:0000313|EMBL:AGG90297.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2560_curated_21
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19966..20439
DNA (474bp) protein (158aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL2_9GAMM
GCN5 family acetyltransferase {ECO:0000313|EMBL:AHX12180.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
acetyltransferase
scnpilot_solids2_trim150_scaffold_2560_curated_22
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20507..21460)
DNA (954bp) protein (318aa)
SapC protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L5_9GAMM
SapC
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_2560_curated_23
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21502..22113
DNA (612bp) protein (204aa)
Restriction endonuclease n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL0_9GAMM
restriction endonuclease
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_2560_curated_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22224..24113
DNA (1890bp) protein (630aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJM1_9GAMM
scnpilot_solids2_trim150_scaffold_2560_curated_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24384..24659
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYB2_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2560_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24718..25539)
DNA (822bp) protein (274aa)
(protein release factor)-glutamine N5-methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacte
Release factor glutamine methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKK7_9GAMM
scnpilot_solids2_trim150_scaffold_2560_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25532..29659)
DNA (4128bp) protein (1376aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKK6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGG90305.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2560_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29983..31830)
DNA (1848bp) protein (616aa)
Aminopeptidase N n=1 Tax=Rhodanobacter denitrificans RepID=M4NBD7_9GAMM
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AGG87909.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 28 items

View Taxonomy