ggKbase home page

scnpilot_solids2_trim150_scaffold_3676_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3676_curated_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..317)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348D2F2
Uncharacterized protein {ECO:0000313|EMBL:AIF47811.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_solids2_trim150_scaffold_3676_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(529..1221)
DNA (693bp) protein (231aa)
Universal bacterial protein YeaZ n=1 Tax=Rhodanobacter denitrificans RepID=M4NGZ6_9GAMM
universal bacterial protein YeaZ
Universal bacterial protein YeaZ {ECO:0000313|EMBL:AGG90220.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3676_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1218..2564)
DNA (1347bp) protein (449aa)
Inner membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR15_9GAMM
Inner membrane protein {ECO:0000313|EMBL:EIL94467.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Inner membrane protein involved in colicin E2 resistance
scnpilot_solids2_trim150_scaffold_3676_curated_4
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2651..3430)
DNA (780bp) protein (260aa)
ABC transporter substrate-binding protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5FCC2
Periplasmic binding protein {ECO:0000313|EMBL:EIT70015.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_3676_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3521..4297)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94463.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3676_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4362..4751)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR18_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02363.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3676_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4801..5433)
DNA (633bp) protein (211aa)
NADP oxidoreductase, coenzyme F420-dependent n=1 Tax=Rhodanobacter denitrificans RepID=I4WR19_9GAMM
putative dinucleotide-binding enzyme
Putative dinucleotide-binding enzyme {ECO:0000313|EMBL:AGG90225.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3676_curated_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5560..6468
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKQ2_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL87793.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_3676_curated_9
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6517..9051
DNA (2535bp) protein (845aa)
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Type III restriction protein res subunit id=1935625 bin=GWD2_Nitrospirae-related_57_8 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
scnpilot_solids2_trim150_scaffold_3676_curated_10
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9061..9948
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCC8_GEOUR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Displaying 10 items

View Taxonomy