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scnpilot_solids2_trim150_scaffold_1812_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1812_curated_1
unknown

Not on your lists

2..949
DNA (948bp) protein (316aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1812_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1080..1826)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVB2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91153.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1812_curated_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2105..3265
DNA (1161bp) protein (387aa)
Group 1 glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN10_9GAMM
Group 1 glycosyl transferase {ECO:0000313|EMBL:EIL88601.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
group 1 glycosyl transferase
scnpilot_solids2_trim150_scaffold_1812_curated_4
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3619..3978
DNA (360bp) protein (120aa)
Transcriptional regulator, XRE family id=2300181 bin=GWB2_Geobacter-like_52_12 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
XRE family transcriptional regulator
Tax=GWC2_Geobacteraceae_53_11_curated
scnpilot_solids2_trim150_scaffold_1812_curated_5
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4073..4675
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C267_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EWS63419.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1812_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4874..5614)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVB2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91153.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1812_curated_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5639..6790)
DNA (1152bp) protein (384aa)
undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase; K02851 UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33]
Undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W073_9GAMM
Undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase {ECO:0000313|EMBL:EIL92864.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_1812_curated_8
unknown

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7362..7646
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1812_curated_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7755..8858
DNA (1104bp) protein (368aa)
Putative polysaccharide export protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W865_9GAMM
Putative polysaccharide export protein {ECO:0000313|EMBL:EIL95656.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative polysaccharide export protein; K01991 polysaccharide export outer membrane protein
scnpilot_solids2_trim150_scaffold_1812_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8872..9552
DNA (681bp) protein (227aa)
Lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W274_9GAMM
Lipoprotein {ECO:0000313|EMBL:EIL93565.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lipoprotein
scnpilot_solids2_trim150_scaffold_1812_curated_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9549..10361
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W863_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95654.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1812_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10358..12505
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W276_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93567.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1812_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12983..13624)
DNA (642bp) protein (214aa)
HAD-superfamily hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD8_9GAMM
HAD-superfamily hydrolase {ECO:0000313|EMBL:EIL98529.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative phosphatase
scnpilot_solids2_trim150_scaffold_1812_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13624..14793)
DNA (1170bp) protein (390aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD9_9GAMM
scnpilot_solids2_trim150_scaffold_1812_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14991..15653
DNA (663bp) protein (221aa)
maleylacetoacetate isomerase (EC:5.2.1.2)
Maleylacetoacetate isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E3_9GAMM
Maleylacetoacetate isomerase {ECO:0000313|EMBL:EIL93284.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1812_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15769..16881)
DNA (1113bp) protein (371aa)
Pilus retraction protein PilT n=2 Tax=Rhodanobacter denitrificans RepID=M4NAW7_9GAMM
pilus retraction protein PilT
Pilus retraction protein PilT {ECO:0000313|EMBL:AGG87730.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1812_curated_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16966..17529
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGE2_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1812_curated_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17526..18185
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSQ5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1812_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18530..18757
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93288.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1812_curated_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18908..19060
DNA (153bp) protein (51aa)
cysteine synthase (EC:4.2.1.22)
Cysteine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGE5_9GAMM
Cysteine synthase {ECO:0000313|EMBL:EIL98536.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 20 items

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