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scnpilot_solids2_trim150_scaffold_3813_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3813_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..746)
DNA (744bp) protein (248aa)
General secretion pathway protein D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W358_9GAMM
General secretion pathway protein D {ECO:0000313|EMBL:EIL93899.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
general secretion pathway protein D
scnpilot_solids2_trim150_scaffold_3813_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(750..1472)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NM97_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90778.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3813_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1469..2107)
DNA (639bp) protein (213aa)
Putative general secretion pathway protein M n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGQ8_9GAMM
Putative general secretion pathway protein M {ECO:0000313|EMBL:EIL98649.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Tfp pilus assembly protein PilO
scnpilot_solids2_trim150_scaffold_3813_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2104..3261)
DNA (1158bp) protein (386aa)
Tfp pilus assembly protein PilN n=1 Tax=Rhodanobacter denitrificans RepID=M4NIK2_9GAMM
Tfp pilus assembly protein PilN
Tfp pilus assembly protein PilN {ECO:0000313|EMBL:AGG90780.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3813_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3258..4130)
DNA (873bp) protein (291aa)
Type II secretion system protein K n=1 Tax=Rhodanobacter denitrificans RepID=I4WMR2_9GAMM
type II secretory pathway, component PulK
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3813_curated_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4127..4786)
DNA (660bp) protein (220aa)
General secretion pathway protein J n=1 Tax=Rhodanobacter denitrificans RepID=I4WMR3_9GAMM
prepilin-type N-terminal cleavage/methylation domain-containing protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3813_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4783..5316)
DNA (534bp) protein (178aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMR4_9GAMM
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGG90783.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3813_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5313..5723)
DNA (411bp) protein (137aa)
General secretion pathway protein H n=1 Tax=Rhodanobacter denitrificans RepID=I4WMR5_9GAMM
general secretion pathway protein H
General secretion pathway protein H {ECO:0000313|EMBL:AGG90784.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3813_curated_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5879..6112)
DNA (234bp) protein (78aa)
general secretion pathway protein G n=1 Tax=Dyella japonica RepID=UPI00031DA041
General secretion pathway protein GspG {ECO:0000313|EMBL:AIF46598.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
general secretion pathway protein G
scnpilot_solids2_trim150_scaffold_3813_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6454..7671)
DNA (1218bp) protein (406aa)
General secretion pathway protein F n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGR5_9GAMM
General secretion pathway protein F {ECO:0000313|EMBL:EIL98656.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
general secretion pathway protein F
scnpilot_solids2_trim150_scaffold_3813_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7786..8442)
DNA (657bp) protein (219aa)
General secretory pathway protein E n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W368_9GAMM
General secretory pathway protein E {ECO:0000313|EMBL:EIL93909.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type II secretion system protein E (GspE)
Displaying 11 items

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