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scnpilot_solids2_trim150_scaffold_1772_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1772_curated_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..164
DNA (162bp) protein (54aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZ79_9GAMM
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LuxR family transcriptional regulator {ECO:0000313|EMBL:AIF48745.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_solids2_trim150_scaffold_1772_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

370..1716
DNA (1347bp) protein (449aa)
Polyketide cyclase/dehydrase and lipid transport n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3V6_9GAMM
Polyketide cyclase/dehydrase and lipid transport {ECO:0000313|EMBL:EIL94147.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1772_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1905..2849
DNA (945bp) protein (315aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NFU2_9GAMM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG89810.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2846..3580
DNA (735bp) protein (245aa)
ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3V4_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL94145.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
CcmB protein
scnpilot_solids2_trim150_scaffold_1772_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3584..5500
DNA (1917bp) protein (639aa)
ABC transporter involved in gliding motility, auxiliary component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU73_9GAMM
ABC transporter involved in gliding motility, auxiliary component {ECO:0000313|EMBL:EIM03015.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
scnpilot_solids2_trim150_scaffold_1772_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5621..6484
DNA (864bp) protein (288aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NI79_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89807.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6495..6971)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU75_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03017.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1772_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6968..7582)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYV6_9GAMM
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:AGG89805.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7665..8042
DNA (378bp) protein (126aa)
Uncharacterized small membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFX5_9GAMM
uncharacterized small membrane protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1772_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8092..8511
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3U8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94139.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1772_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8515..9288)
DNA (774bp) protein (258aa)
Membrane-bound metalloprotease n=1 Tax=Rhodanobacter denitrificans RepID=I4WYV9_9GAMM
CAAX amino terminal protease family
CAAX amino terminal protease family {ECO:0000313|EMBL:AGG89802.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9316..9507)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYW0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89801.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9515..10390)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYW1_9GAMM
membrane protease subunit, stomatin/prohibitin
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:AGG89800.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10529..11710
DNA (1182bp) protein (394aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobact
formate-dependent phosphoribosylglycinamide formyltransferase (EC:6.3.4.-)
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WYW2_9GAMM
scnpilot_solids2_trim150_scaffold_1772_curated_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11781..13301
DNA (1521bp) protein (507aa)
glutamate synthase n=1 Tax=Dyella ginsengisoli RepID=UPI0003453638
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:EIL92509.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glutamate synthase family protein
scnpilot_solids2_trim150_scaffold_1772_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13386..14099)
DNA (714bp) protein (238aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative arginyl-tRNA--protein transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU84_9GAMM
putative arginyl-tRNA:protein arginylyltransferase
scnpilot_solids2_trim150_scaffold_1772_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14150..14542)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYW5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89796.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14579..15460)
DNA (882bp) protein (294aa)
Acyl-CoA thiolesterase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU86_9GAMM
Acyl-CoA thiolesterase {ECO:0000313|EMBL:EIM03028.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acyl-CoA thioesterase
scnpilot_solids2_trim150_scaffold_1772_curated_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15681..15818)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU88_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03030.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1772_curated_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15903..16739)
DNA (837bp) protein (279aa)
Transcriptional regulator protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU89_9GAMM
Transcriptional regulator protein {ECO:0000313|EMBL:EIM03031.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA-binding domain-containing protein, AraC-type
scnpilot_solids2_trim150_scaffold_1772_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16770..17324)
DNA (555bp) protein (185aa)
Negative regulator of beta-lactamase expression n=1 Tax=Rhodanobacter denitrificans RepID=M4NFS7_9GAMM
negative regulator of beta-lactamase expression
Negative regulator of beta-lactamase expression {ECO:0000313|EMBL:AGG89790.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17414..17941
DNA (528bp) protein (176aa)
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYX2_9GAMM
alpha/beta hydrolase superfamily enzyme, predicted hydrolase
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase {ECO:0000313|EMBL:AGG89789.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17938..20124
DNA (2187bp) protein (729aa)
Ribosomal RNA large subunit methyltransferase K/L n=3 Tax=Rhodanobacter denitrificans RepID=M4NJB8_9GAMM
putative N6-adenine-specific DNA methylase
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20186..20608
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3T6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94127.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1772_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20788..22053
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3T4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94125.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TIGR03440 family protein
scnpilot_solids2_trim150_scaffold_1772_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22050..23039
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY40_9GAMM
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AGG89784.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1772_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23123..24628)
DNA (1506bp) protein (502aa)
Carboxypeptidase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3T2_9GAMM
Carboxypeptidase-like protein {ECO:0000313|EMBL:EIL94123.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carboxypeptidase C (cathepsin A)
scnpilot_solids2_trim150_scaffold_1772_curated_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24718..25329)
DNA (612bp) protein (204aa)
Putative NAD(P)H-dependent FMN reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3T1_9GAMM
Putative NAD(P)H-dependent FMN reductase {ECO:0000313|EMBL:EIL94122.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative flavoprotein
scnpilot_solids2_trim150_scaffold_1772_curated_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25350..25943)
DNA (594bp) protein (198aa)
Lysine exporter protein LysE/YggA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3T0_9GAMM
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EIL94121.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative threonine efflux protein
scnpilot_solids2_trim150_scaffold_1772_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26033..26932
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3S9_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94120.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
Displaying items 1-30 of 35 in total

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