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scnpilot_solids2_trim150_scaffold_1872_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1872_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..283)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Z3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93484.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1872_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(283..903)
DNA (621bp) protein (207aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SOS regulatory protein LexA; K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Z4_9GAMM
scnpilot_solids2_trim150_scaffold_1872_curated_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1029..2099)
DNA (1071bp) protein (357aa)
Tetratricopeptide repeat protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCS6_9GAMM
tetratricopeptide repeat protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1872_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2182..2841)
DNA (660bp) protein (220aa)
Thiopurine S-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626}; EC=2.1.1.67 {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626};; Thiopurine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Thiopurine S-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDR6_9GAMM
thiopurine S-methyltransferase, Se/Te detoxification family
scnpilot_solids2_trim150_scaffold_1872_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3070..3561
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVQ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91294.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1872_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3545..3898
DNA (354bp) protein (118aa)
ArsR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVQ2_9GAMM
ArsR family transcriptional regulator {ECO:0000313|EMBL:EIL91293.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1872_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3931..4740)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVP7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91288.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1872_curated_8
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4793..5278)
DNA (486bp) protein (162aa)
Fimbrial protein pilin n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7R8X3_KANKD
Fimbrial protein pilin; K02650 type IV pilus assembly protein PilA
Fimbrial protein pilin {ECO:0000313|EMBL:ACV25986.1}; Flags: Precursor;; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125).;"
scnpilot_solids2_trim150_scaffold_1872_curated_9
unknown

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comp(5281..6246)
DNA (966bp) protein (322aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1872_curated_10
unknown

Not on your lists

comp(6253..6708)
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1872_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6978..8198
DNA (1221bp) protein (407aa)
Putative hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVP2_9GAMM
Putative hydrolase {ECO:0000313|EMBL:EIL91283.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative hydrolase
scnpilot_solids2_trim150_scaffold_1872_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8293..9519)
DNA (1227bp) protein (409aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG88740.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids2_trim150_scaffold_1872_curated_13
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9806..10624
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HAZ1_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM67930.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
scnpilot_solids2_trim150_scaffold_1872_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10673..10819)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVN0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91271.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1872_curated_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10938..11951)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWV6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91697.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_1872_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12229..12537
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFX2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98363.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1872_curated_17
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12753..13196
DNA (444bp) protein (148aa)
activator of HSP90 ATPase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D5627
Activator of HSP90 ATPase {ECO:0000313|EMBL:EYR67290.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1872_curated_18
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13362..14192)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI000377DC08
DNA methyltransferase {ECO:0000313|EMBL:KHE74180.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
adenine-specific DNA methyltransferase
scnpilot_solids2_trim150_scaffold_1872_curated_19
Actinomyces johnsonii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14390..15085)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Actinomyces johnsonii F0542 RepID=U1QWA1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERH21346.1}; TaxID=1227262 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces johnsonii F0510.;"
hypothetical protein
Displaying 19 items

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