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scnpilot_solids2_trim150_scaffold_4997_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4997_curated_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..2862)
DNA (2862bp) protein (954aa)
DNA/RNA helicase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY8_9GAMM
DNA/RNA helicase, superfamily II, SNF2 family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4997_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2956..3981)
DNA (1026bp) protein (342aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY9_9GAMM
scnpilot_solids2_trim150_scaffold_4997_curated_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3991..4494)
DNA (504bp) protein (168aa)
Protein-export protein SecB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ0_9GAMM
protein translocase subunit secB
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4997_curated_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4809..5045
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC3_9GAMM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
LSU ribosomal protein L28P
scnpilot_solids2_trim150_scaffold_4997_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5056..5223
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Rhodanobacter denitrificans RepID=I4WJN0_9GAMM
ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4997_curated_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5493..6041
DNA (549bp) protein (183aa)
Saccharopine dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC5_9GAMM
Saccharopine dehydrogenase {ECO:0000313|EMBL:EIL89766.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4997_curated_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6031..6447
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89767.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4997_curated_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6437..7549)
DNA (1113bp) protein (371aa)
Saccharopine dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC7_9GAMM
Saccharopine dehydrogenase {ECO:0000313|EMBL:EIL89768.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Saccharopine dehydrogenase
scnpilot_solids2_trim150_scaffold_4997_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7631..8824)
DNA (1194bp) protein (398aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ6_9GAMM
fatty-acid desaturase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4997_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9011..9769
DNA (759bp) protein (253aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ7_9GAMM
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL89638.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids2_trim150_scaffold_4997_curated_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9766..10521
DNA (756bp) protein (252aa)
ABC transporter permease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRD0_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL89771.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4997_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10521..11876
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89640.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type uncharacterized transporter
scnpilot_solids2_trim150_scaffold_4997_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11880..12374
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90617.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4997_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12477..13304
DNA (828bp) protein (276aa)
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM4_9GAMM
scnpilot_solids2_trim150_scaffold_4997_curated_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13525..13785
DNA (261bp) protein (87aa)
Nitroreductase-like oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM8_9GAMM
Nitroreductase-like oxidoreductase {ECO:0000313|EMBL:EIL97219.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
oxidoreductase family protein; K07078
Displaying 15 items

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