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scnpilot_solids2_trim150_scaffold_4733_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4733_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..752
DNA (750bp) protein (250aa)
Glutathione synthase/ribosomal protein S6 modification protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC91_9GAMM
Glutathione synthase/ribosomal protein S6 modification protein {ECO:0000313|EMBL:EIL97082.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)
scnpilot_solids2_trim150_scaffold_4733_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(757..1017)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCI3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90992.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4733_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1211..2041
DNA (831bp) protein (277aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD9_9GAMM
scnpilot_solids2_trim150_scaffold_4733_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2164..2706
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJD2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90989.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4733_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2713..3246)
DNA (534bp) protein (178aa)
Transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNA8_9GAMM
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase {ECO:0000313|EMBL:AGG90988.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4733_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3340..5397
DNA (2058bp) protein (686aa)
Zn-dependent oligopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC30_9GAMM
Zn-dependent oligopeptidase {ECO:0000313|EMBL:EIL97021.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-dependent oligopeptidase
scnpilot_solids2_trim150_scaffold_4733_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5572..5781)
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB0_9GAMM
cold shock protein
Cold shock protein {ECO:0000313|EMBL:AGG90986.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4733_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6001..6768
DNA (768bp) protein (256aa)
Exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUE6_9GAMM
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIL90837.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_4733_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6774..7451
DNA (678bp) protein (226aa)
YecA family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJC8_9GAMM
yecA family protein
YecA family protein {ECO:0000313|EMBL:AGG90984.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4733_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7525..8274
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMZ1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90983.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4733_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8379..9212
DNA (834bp) protein (278aa)
Pirin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC35_9GAMM
Pirin {ECO:0000313|EMBL:EIL97026.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Pirin-related protein
scnpilot_solids2_trim150_scaffold_4733_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9513..9755)
DNA (243bp) protein (81aa)
Sugar ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB5_9GAMM
Sugar ABC transporter permease {ECO:0000313|EMBL:EIL90846.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
Displaying 12 items

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