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scnpilot_solids2_trim150_scaffold_4519_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4519_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25..519)
DNA (495bp) protein (165aa)
Lipopolysaccharide modification acyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ1_9GAMM
Lipopolysaccharide modification acyltransferase {ECO:0000313|EMBL:EIL90182.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative acyltransferase
scnpilot_solids2_trim150_scaffold_4519_curated_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(710..1246)
DNA (537bp) protein (179aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Peptide deformylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNX5_9GAMM
peptide deformylase
scnpilot_solids2_trim150_scaffold_4519_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1328..2110)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90185.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4519_curated_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2281..4353
DNA (2073bp) protein (691aa)
Carbon starvation protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ82_9GAMM
Carbon starvation protein {ECO:0000313|EMBL:EIL87273.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
carbon starvation protein, predicted membrane protein
scnpilot_solids2_trim150_scaffold_4519_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4355..4549
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZD2_9GAMM
uncharacterized small protein
Uncharacterized protein {ECO:0000313|EMBL:EIL90187.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_4519_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4577..5374)
DNA (798bp) protein (266aa)
Methyltransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEH7_9GAMM
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AGG87923.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4519_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5547..6074
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90188.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4519_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6062..6955)
DNA (894bp) protein (298aa)
Putative permease, DMT superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4NJE8_9GAMM
putative permease, DMT superfamily
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4519_curated_9
unknown

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comp(7047..7157)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4519_curated_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7249..8175)
DNA (927bp) protein (309aa)
Putative glycosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK1_9GAMM
putative glycosyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4519_curated_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8244..8990)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJB7_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4519_curated_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9020..9502)
DNA (483bp) protein (161aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ76_9GAMM
Displaying 12 items

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