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scnpilot_solids2_trim150_scaffold_929_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_929_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1395)
DNA (1395bp) protein (465aa)
Cation/multidrug efflux pump n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E7_9GAMM
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIL93638.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation/multidrug efflux pump
scnpilot_solids2_trim150_scaffold_929_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1538..3403)
DNA (1866bp) protein (622aa)
TonB-dependent receptor protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E6_9GAMM
TonB-dependent receptor protein {ECO:0000313|EMBL:EIL93637.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent vitamin B12 receptor
scnpilot_solids2_trim150_scaffold_929_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4103..7225
DNA (3123bp) protein (1041aa)
Outer membrane receptor protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NA75_9GAMM
outer membrane receptor protein
Outer membrane receptor protein {ECO:0000313|EMBL:AGG87320.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_929_curated_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7336..8937
DNA (1602bp) protein (534aa)
Sulfotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA84_9GAMM
sulfotransferase family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_929_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8961..10577
DNA (1617bp) protein (539aa)
Sulfotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NC20_9GAMM
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG87317.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_929_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10597..11820)
DNA (1224bp) protein (408aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUV9_9GAMM
N-acetylglucosamine-6-phosphate deacetylase
scnpilot_solids2_trim150_scaffold_929_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11884..12915)
DNA (1032bp) protein (344aa)
Putative phosphosugar isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NA82_9GAMM
putative phosphosugar isomerase
Putative phosphosugar isomerase {ECO:0000313|EMBL:AGG87314.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_929_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12925..13689)
DNA (765bp) protein (255aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E3_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL93634.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_929_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14029..15492
DNA (1464bp) protein (488aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEQ5_9GAMM
glucose-6-phosphate 1-dehydrogenase
scnpilot_solids2_trim150_scaffold_929_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15569..16282
DNA (714bp) protein (238aa)
6-phosphogluconolactonase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEQ4_9GAMM
6-phosphogluconolactonase
6-phosphogluconolactonase {ECO:0000313|EMBL:AGG87311.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_929_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16450..18267
DNA (1818bp) protein (606aa)
Phosphogluconate dehydratase {ECO:0000313|EMBL:EIL93631.1}; EC=4.2.1.12 {ECO:0000313|EMBL:EIL93631.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphogluconate dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E0_9GAMM
6-phosphogluconate dehydratase
scnpilot_solids2_trim150_scaffold_929_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18391..19047
DNA (657bp) protein (219aa)
2-keto-3-deoxy-phosphogluconate aldolase (EC:4.1.2.14)
Entner-Doudoroff aldolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEQ2_9GAMM
Entner-Doudoroff aldolase {ECO:0000313|EMBL:EIL97943.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_929_curated_13
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19063..19632)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DE965
Relaxation protein {ECO:0000313|EMBL:KGE52537.1}; TaxID=325777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. vasculorum.;"
relaxation protein
scnpilot_solids2_trim150_scaffold_929_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19663..21873)
DNA (2211bp) protein (737aa)
phospholipase n=1 Tax=Pseudomonas geniculata RepID=UPI00029A1584
Phospholipase {ECO:0000313|EMBL:EZP44871.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
phospholipase A1
scnpilot_solids2_trim150_scaffold_929_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22002..22874
DNA (873bp) protein (291aa)
lipoprotein n=1 Tax=Pseudomonas geniculata RepID=UPI00029AB620
Ankyrin repeat protein {ECO:0000313|EMBL:EZP44870.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ankyrin-like protein
scnpilot_solids2_trim150_scaffold_929_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22959..25010)
DNA (2052bp) protein (684aa)
transketolase (EC:2.2.1.1)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Transketolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NU55_9GAMM
scnpilot_solids2_trim150_scaffold_929_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25059..26705)
DNA (1647bp) protein (549aa)
Phosphoglucomutase {ECO:0000313|EMBL:EIL90873.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EIL90873.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoglucomutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WND6_9GAMM
phosphoglucomutase, alpha-D-glucose phosphate-specific
scnpilot_solids2_trim150_scaffold_929_curated_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26847..28484)
DNA (1638bp) protein (546aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glucose-6-phosphate isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAH7_9GAMM
glucose-6-phosphate isomerase
scnpilot_solids2_trim150_scaffold_929_curated_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28481..29584)
DNA (1104bp) protein (368aa)
transaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMT8_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_929_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29628..30329)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLM0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90957.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_929_curated_21
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30326..31285)
DNA (960bp) protein (320aa)
glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JLE2_9GAMM
Displaying 21 items

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