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scnpilot_solids2_trim150_scaffold_2598_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2598_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..533
DNA (531bp) protein (177aa)
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glyceraldehyde-3-phosphate dehydrogenase (NAD+) n=1 Tax=Rhodanobacter denitrificans RepID=M4NE03_9GAMM
scnpilot_solids2_trim150_scaffold_2598_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(602..2911)
DNA (2310bp) protein (770aa)
Nitric-oxide reductase subunit B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D2_9GAMM
Nitric-oxide reductase subunit B {ECO:0000313|EMBL:EIL93273.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nitric oxide reductase large subunit
scnpilot_solids2_trim150_scaffold_2598_curated_3
unknown

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2931..3224
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2598_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3101..3424)
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Rhodanobacter denitrificans RepID=I4WME6_9GAMM
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AGG87717.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2598_curated_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3566..4012
DNA (447bp) protein (149aa)
Azurin n=1 Tax=Rhodanobacter denitrificans RepID=I4WME7_9GAMM
azurin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2598_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4095..4502
DNA (408bp) protein (136aa)
Globin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1C9_9GAMM
Globin {ECO:0000313|EMBL:EIL93270.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
truncated hemoglobin
scnpilot_solids2_trim150_scaffold_2598_curated_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4679..5179)
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
peroxiredoxin (EC:1.11.1.5)
Probable thiol peroxidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VX94_9GAMM
scnpilot_solids2_trim150_scaffold_2598_curated_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5205..5642)
DNA (438bp) protein (146aa)
Integral membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VX95_9GAMM
Integral membrane protein {ECO:0000313|EMBL:EIL91836.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2598_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5882..7000
DNA (1119bp) protein (373aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY6_9GAMM
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:EIM02928.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cysteine synthase
scnpilot_solids2_trim150_scaffold_2598_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7108..7869
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter denitrificans RepID=I4WYQ0_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89864.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2598_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7895..8332
DNA (438bp) protein (146aa)
Universal stress protein UspA-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYP9_9GAMM
universal stress protein UspA-like protein
Universal stress protein UspA-like protein {ECO:0000313|EMBL:AGG89865.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2598_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8355..10883
DNA (2529bp) protein (843aa)
Cation transporting P-type ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU17_9GAMM
Cation transporting P-type ATPase {ECO:0000313|EMBL:EIM02959.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
P-type ATPase, translocating
scnpilot_solids2_trim150_scaffold_2598_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10996..11619
DNA (624bp) protein (208aa)
TetR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WYP7_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG89867.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2598_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11622..12041
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJK4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89868.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2598_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12071..13096
DNA (1026bp) protein (342aa)
Putative efflux pump membrane fusion protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYP5_9GAMM
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGG89869.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2598_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13099..14637
DNA (1539bp) protein (513aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NFZ1_9GAMM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG89870.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 16 items

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