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scnpilot_solids2_trim150_scaffold_4797_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4797_curated_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..492)
DNA (492bp) protein (164aa)
ATP synthase subunit a n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLS4_9GAMM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
F0F1-type ATP synthase, alpha subunit
scnpilot_solids2_trim150_scaffold_4797_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(496..861)
DNA (366bp) protein (122aa)
ATP synthase I chain n=1 Tax=Rhodanobacter denitrificans RepID=M4NIR4_9GAMM
ATP synthase I chain
ATP synthase I chain {ECO:0000313|EMBL:AGG90840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4797_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1122..1508)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2K5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93696.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phasin protein
scnpilot_solids2_trim150_scaffold_4797_curated_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1661..2023)
DNA (363bp) protein (121aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIF1_9GAMM
queuosine biosynthesis protein QueD
scnpilot_solids2_trim150_scaffold_4797_curated_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2340..2780
DNA (441bp) protein (147aa)
RNA pyrophosphohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2H7_9GAMM
NTP pyrophosphohydrolase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4797_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2899..3105
DNA (207bp) protein (69aa)
Bacterioferritin-associated ferredoxin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL1_9GAMM
Bacterioferritin-associated ferredoxin {ECO:0000313|EMBL:EIL98252.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
bacterioferritin-associated ferredoxin
scnpilot_solids2_trim150_scaffold_4797_curated_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3217..3687
DNA (471bp) protein (157aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Bacterioferritin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLQ8_9GAMM
bacterioferritin
scnpilot_solids2_trim150_scaffold_4797_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3800..4552
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NTS1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4797_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4539..4973
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK8_9GAMM
Integral membrane protein CcmA involved in cell shape determination
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4797_curated_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5020..5388
DNA (369bp) protein (123aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK7_9GAMM
Iron-sulfur cluster assembly accessory protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4797_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5399..6373
DNA (975bp) protein (325aa)
Zn-finger containing NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK6_9GAMM
Zn-finger containing NTP pyrophosphohydrolase {ECO:0000313|EMBL:EIL98247.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-finger containing NTP pyrophosphohydrolase
scnpilot_solids2_trim150_scaffold_4797_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6476..7087
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BCE8A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87232.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4797_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7155..8024
DNA (870bp) protein (290aa)
Membrane protein required for beta-lactamase induction n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK4_9GAMM
Membrane protein required for beta-lactamase induction {ECO:0000313|EMBL:EIL98245.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane protein required for beta-lactamase induction
scnpilot_solids2_trim150_scaffold_4797_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8100..9548)
DNA (1449bp) protein (483aa)
Fatty acid permease / acyltransferase fusion protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK3_9GAMM
Fatty acid permease / acyltransferase fusion protein {ECO:0000313|EMBL:EIL98244.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
Displaying 14 items

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