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scnpilot_solids2_trim150_scaffold_2916_curated_7

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 5373..5912

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 178.0
  • Bit_score: 327
  • Evalue 1.50e-86
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 176.0
  • Bit_score: 322
  • Evalue 8.30e-86
Pseudouridine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFC5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 178.0
  • Bit_score: 327
  • Evalue 1.10e-86

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGTTGCTGGCGCTCAACAAGCCGTATGGCGTGCTCTGCCAGTTCACCGACCGCGAGGGCCGCGCCACGCTGGCCGATTACGTCGCGCAAACGGACGTCTATGCGGCTGGACGGCTGGACCGCGACAGCGAAGGCCTGCTGCTGCTGACCGACGACGGCCCGCTCGCGCACCGCCTCACCGACCCGCGCCACAAGCAGGCCAAGACCTATCTCGCCCAGGTCGATGGTCGCATCGACGAAGCGGCGCTGGCCGCGCTGCGCCGCGGCGTGACGTTGAACGACGGCCCGACCCTGCCGGCCGAGGCCGCGTTCGCCACTGAACCGGACTGGCTGTGGCCGCGCGACCCGCCGGTCCGCTTCCGCCAGGCTATTCCCACCAGCTGGCTCAGCCTGACCCTGCGCGAAGGCCGCAACCGGCAGGTGCGCCGCATGACCGCCGCGGTCGGCTTTCCCACCCTGCGCCTGATCCGTGTGCGCATCGGCGAGCACGCTCTGGATGGCCTGGCTCCGGGCGAATCGCGCGTCGTCCCGTTGTTGTAG
PROTEIN sequence
Length: 180
MLLALNKPYGVLCQFTDREGRATLADYVAQTDVYAAGRLDRDSEGLLLLTDDGPLAHRLTDPRHKQAKTYLAQVDGRIDEAALAALRRGVTLNDGPTLPAEAAFATEPDWLWPRDPPVRFRQAIPTSWLSLTLREGRNRQVRRMTAAVGFPTLRLIRVRIGEHALDGLAPGESRVVPLL*