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scnpilot_solids2_trim150_scaffold_2916_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2916_curated_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..681
DNA (681bp) protein (227aa)
Isocitrate dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPI5_9GAMM
isocitrate dehydrogenase, NADP-dependent, monomeric type
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2916_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(678..1646)
DNA (969bp) protein (323aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2P8_9GAMM
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EIL93739.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_2916_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1749..1946)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIR1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90794.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2916_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2055..2975
DNA (921bp) protein (307aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NMB2_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG90793.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2916_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3049..4161
DNA (1113bp) protein (371aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glutathione-dependent formaldehyde dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS3_9GAMM
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_2916_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4395..5339
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS1_9GAMM
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AGG90790.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2916_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5373..5912
DNA (540bp) protein (180aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
pseudouridine synthase family protein (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFC5_9GAMM
scnpilot_solids2_trim150_scaffold_2916_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6014..6826)
DNA (813bp) protein (271aa)
Mg-dependent DNase (EC:3.1.21.-)
Mg-dependent DNase {ECO:0000313|EMBL:AGG90788.1}; EC=3.1.21.- {ECO:0000313|EMBL:AGG90788.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Mg-dependent DNase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMR9_9GAMM
scnpilot_solids2_trim150_scaffold_2916_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7092..8204
DNA (1113bp) protein (371aa)
Type II secretion system protein E (GspE) n=1 Tax=Rhodanobacter denitrificans RepID=M4NL36_9GAMM
type II secretion system protein E (GspE)
Type II secretion system protein E (GspE) {ECO:0000313|EMBL:AGG90787.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 9 items

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