ggKbase home page

scnpilot_solids2_trim150_scaffold_2868_curated_1

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 2..838

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family protein n=2 Tax=Rhodanobacter RepID=I4WGH0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 278.0
  • Bit_score: 505
  • Evalue 2.60e-140
Transposase IS4 family protein {ECO:0000313|EMBL:EQD26326.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 276.0
  • Bit_score: 332
  • Evalue 7.20e-88
transposase IS4 similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 276.0
  • Bit_score: 303
  • Evalue 8.00e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 837
AACGAACCGCTCGATATCGAGCTGGCGCATACCGCGTATGCGCTCGACTCCACCACGATCGAGCTATGCCTGTCGGTCTTCCCTTGGGCGCGAGCGATGCACCCCGGTCGCGGCGGATTGAAGGTACATACGCTGCTCGACATTCGCGGCGCAATCCCTACGGTCATCAGCTTTTCCGAGTCCCGCCAACACGACGTCCACATGCTCGACGAGCTCGTGCCCGAACCAGGCGCGATCTATCTGATGGATCGCGCCTACCTCGATTTCGAGCGCCTCTACCGATTCCACTGTGAAGGCTCCTTCTTCTTGATGCGCACCAAGAAGAACCTCCGCGTGCGACGACGCTACTCCCATCCGGTGTCTGATCGCACGCTCATCGGTTGCGATCAGACCGTCGTGTTGACACGGGACGTCGTCCGCAAGAAATACCCCGGCCCGCTACGCCGTGTACGCGTGCGTGACCCCGACAGCGGTCAGTCCATCGTCTTGCTGACCAATCACTTTGCGCTTCCTGCGGCGACCATCAGTGCCCTGTATCGCCACCGTTGGCAGATCGAAATTTTCTTCAAATGGATCAAGCAGCACCTGCGCATCAAGGCGTTCTTCGGCACCTCGCCCAACGCGGTGAAGACGCAGGTCTGGATCGCCGTCGCCGTCTACGTGCTGATCGCCATCGTGCGCAAGCGTCTCCAGTTGACGACCTCACTCTATGAACTTCTACAGATTCTGAGCGTGACGTTGTTCGAGCAAACCCCGCTGGAATGCGCCTTGCGGCGGCAGGAGCTACAGCTTTCTGCCGACGACGACGCTAACCAACTGATTCTATTTCCGGATTAA
PROTEIN sequence
Length: 279
NEPLDIELAHTAYALDSTTIELCLSVFPWARAMHPGRGGLKVHTLLDIRGAIPTVISFSESRQHDVHMLDELVPEPGAIYLMDRAYLDFERLYRFHCEGSFFLMRTKKNLRVRRRYSHPVSDRTLIGCDQTVVLTRDVVRKKYPGPLRRVRVRDPDSGQSIVLLTNHFALPAATISALYRHRWQIEIFFKWIKQHLRIKAFFGTSPNAVKTQVWIAVAVYVLIAIVRKRLQLTTSLYELLQILSVTLFEQTPLECALRRQELQLSADDDANQLILFPD*