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scnpilot_solids2_trim150_scaffold_4409_curated_10

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(9304..9789)

Top 3 Functional Annotations

Value Algorithm Source
Rod shape-determining protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 161.0
  • Bit_score: 292
  • Evalue 2.00e-76
Rod shape-determining protein {ECO:0000313|EMBL:EIL89554.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 161.0
  • Bit_score: 292
  • Evalue 2.80e-76
rod shape-determining protein MreD similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 161.0
  • Bit_score: 289
  • Evalue 5.30e-76

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGAGTCGCGCGCGACTGAGCCAATGGTGGTTCGTCGGCACGCTGGCCGCATCGCTGCTGCTGATGCTGGTGCCGCTGCCTGGCGTGCTGGAGCCCTTCAAACCGTACTGGCCGGCGCTGGTACTGCTGTACTGGGCGCTGGAATCGGAAGACCGGGTGAGCCTGGGCCTCGCCTTCGGCGTGGGCCTGTTTGCGGACCTGCTCGACGGCGTGCTGCTGGGCGAGCAGGCGTTGCGGCTGTGCGCGCTGGTCTTCATCACCGTGCGGTTCCGTTCGCGCTTGCGTTTCTTCCCGATGTGGCAGCAGGCACTGGCGGTGCTGGCCTTGCTGCTGAACGACCGCATCCTGCTGTTGCTGGTGCGCATGCTGGCGGGTGCGTCACTGCCGCCGGCGAGCTGGTGGATTTCCCCCTTTGTCGGCGCGGCGCTGTGGCCGTTCCTGTTCCTGCTGCTCGACGATCTGCGCGCGCGGTTGCGGATCCAATGA
PROTEIN sequence
Length: 162
MSRARLSQWWFVGTLAASLLLMLVPLPGVLEPFKPYWPALVLLYWALESEDRVSLGLAFGVGLFADLLDGVLLGEQALRLCALVFITVRFRSRLRFFPMWQQALAVLALLLNDRILLLLVRMLAGASLPPASWWISPFVGAALWPFLFLLLDDLRARLRIQ*