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scnpilot_solids2_trim150_scaffold_4409_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4409_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..834)
DNA (834bp) protein (278aa)
C-terminal processing peptidase n=3 Tax=Rhodanobacter denitrificans RepID=M4NCQ8_9GAMM
C-terminal processing peptidase
C-terminal processing peptidase {ECO:0000313|EMBL:AGG87577.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4409_curated_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(843..1853)
DNA (1011bp) protein (337aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Lipoyl synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN51_9GAMM
lipoate synthase
scnpilot_solids2_trim150_scaffold_4409_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1864..2373)
DNA (510bp) protein (170aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
Octanoyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFT5_9GAMM
lipoate-protein ligase B
scnpilot_solids2_trim150_scaffold_4409_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2607..2897)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFT6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98327.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4409_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2897..4117)
DNA (1221bp) protein (407aa)
Penicillin-binding protein 6 n=3 Tax=Rhodanobacter denitrificans RepID=M4NDP0_9GAMM
penicillin-binding protein 6
Penicillin-binding protein 6 {ECO:0000313|EMBL:AGG87573.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4409_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4218..5015)
DNA (798bp) protein (266aa)
Rare lipoprotein A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQQ9_9GAMM
Rare lipoprotein A {ECO:0000313|EMBL:EIL89550.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
rare lipoprotein A
scnpilot_solids2_trim150_scaffold_4409_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5114..6118)
DNA (1005bp) protein (335aa)
Lytic murein transglycosylase B n=2 Tax=Rhodanobacter denitrificans RepID=M4NIE5_9GAMM
lytic murein transglycosylase B
Lytic murein transglycosylase B {ECO:0000313|EMBL:AGG87571.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4409_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6214..7329)
DNA (1116bp) protein (372aa)
Rod shape-determining protein RodA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR1_9GAMM
cell elongation-specific peptidoglycan biosynthesis regulator RodA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4409_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7326..9287)
DNA (1962bp) protein (654aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AGG87569.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AGG87569.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Peptidoglycan glycosyltransferase n=5 Tax=Rhodanobacter denitrificans RepID=M4NAN9_9GAMM
scnpilot_solids2_trim150_scaffold_4409_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9304..9789)
DNA (486bp) protein (162aa)
Rod shape-determining protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR3_9GAMM
Rod shape-determining protein {ECO:0000313|EMBL:EIL89554.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
rod shape-determining protein MreD
scnpilot_solids2_trim150_scaffold_4409_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9786..10751)
DNA (966bp) protein (322aa)
Cell shape-determining protein MreC n=1 Tax=Rhodanobacter denitrificans RepID=I4WF10_9GAMM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
rod shape-determining protein MreC
scnpilot_solids2_trim150_scaffold_4409_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10773..11360)
DNA (588bp) protein (196aa)
Rod shape-determining protein MreB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR5_9GAMM
Rod shape-determining protein MreB {ECO:0000313|EMBL:EIL89556.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
rod shape-determining protein MreB
Displaying 12 items

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