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scnpilot_solids2_trim150_scaffold_2957_curated_3

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(1939..2259)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein H-NS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 107.0
  • Bit_score: 193
  • Evalue 1.10e-46
DNA-binding protein H-NS {ECO:0000313|EMBL:EIL90130.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 107.0
  • Bit_score: 193
  • Evalue 1.50e-46
DNA-binding protein H-NS similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 107.0
  • Bit_score: 189
  • Evalue 5.00e-46

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGGCCGTCGATCTCAAGAACCTCAACCACAACCAGCTCAATGACCTGATCAGCAAGGCACAAAGCCGCCAGGATGAATTGCGCAAGGAAAAGGTCGTCAAACTGCGCGAGAAGATCCATGCGCTGATCAAGGCCGAAGGTTATTCGTTCGAAGACATTTTCGGTGGCGCCCGCAAGAGCAAGCGCGCCGGCGCCAAGGTCGCCCCGAAGTACCGCAACCCGGCCAACCCGGCGCAGACCTGGTCCGGCCGCGGCAAGCGTCCGCACTGGTTCAACGACGCGCTGAAGGCGGGCAAGAAGGAAAAGGACCTGGCGATCTGA
PROTEIN sequence
Length: 107
MAVDLKNLNHNQLNDLISKAQSRQDELRKEKVVKLREKIHALIKAEGYSFEDIFGGARKSKRAGAKVAPKYRNPANPAQTWSGRGKRPHWFNDALKAGKKEKDLAI*