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scnpilot_solids2_trim150_scaffold_2957_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2957_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..377
DNA (375bp) protein (125aa)
Membrane protein implicated in regulation of membrane protease activity n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ68_9GAMM
membrane protein implicated in regulation of membrane protease activity
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:AGG87988.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2957_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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374..1654
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ67_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87989.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2957_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1939..2259)
DNA (321bp) protein (107aa)
DNA-binding protein H-NS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD9_9GAMM
DNA-binding protein H-NS {ECO:0000313|EMBL:EIL90130.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-binding protein H-NS
scnpilot_solids2_trim150_scaffold_2957_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2467..4167)
DNA (1701bp) protein (567aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Proline--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD8_9GAMM
prolyl-tRNA synthetase, family II
scnpilot_solids2_trim150_scaffold_2957_curated_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4241..4672)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX14491.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2957_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4795..5565
DNA (771bp) protein (257aa)
phosphatidylserine synthase (EC:2.7.8.8)
Phosphatidylserine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJK6_9GAMM
Phosphatidylserine synthase {ECO:0000313|EMBL:EIL99647.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2957_curated_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5562..6032
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJK5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2957_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6037..6519
DNA (483bp) protein (161aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD4_9GAMM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EIL90125.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosomal-protein-alanine acetyltransferase
scnpilot_solids2_trim150_scaffold_2957_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6571..9405)
DNA (2835bp) protein (945aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJK2_9GAMM
scnpilot_solids2_trim150_scaffold_2957_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9595..10170)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ46_9GAMM
YGGT family protein
YGGT family protein {ECO:0000313|EMBL:AGG88009.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2957_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10167..10991)
DNA (825bp) protein (275aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU9_9GAMM
pyrroline-5-carboxylate reductase
scnpilot_solids2_trim150_scaffold_2957_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11344..11847
DNA (504bp) protein (168aa)
Pilus retraction ATPase PilT n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ44_9GAMM
pilus retraction ATPase PilT
Pilus retraction ATPase PilT {ECO:0000313|EMBL:AGG88011.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 12 items

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