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scnpilot_solids2_trim150_scaffold_3954_curated_3

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 3989..4531

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 175.0
  • Bit_score: 281
  • Evalue 5.20e-73
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EIL94754.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 175.0
  • Bit_score: 281
  • Evalue 7.20e-73
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 173.0
  • Bit_score: 280
  • Evalue 2.80e-73

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGATGAAACCGACGGAGACGCCACGCCGATGACCAGCCGGGAACACCAGCAGCGCTTCGAATCGCTGCTGCACGAGCATCGTCGCATCGTGTTCAAGGTGGCTGGCCTGTACGGCCGCAGCCCCGCCGATCGTGACGACCTGGTGCAGGAGATCAGCGCGCAGCTGTGGCGTTCGTTTGCGCGTTATGACGAACGGCGGGCGAAGTTTTCCACCTGGCTGTACCGCATCGCGCTGAACGTGGCGATCTCGCAGGCGCGGCGCTGGCCCGATCTGGATCGCTGCGAACCGCTGGAAACCCGGCATCTGGAAACCATCGGTGGCGAGGCGGTGGTCGAGCCCGACGAACGCCTGGTCGCGTTGCACGCCTTCATCGGCCAACTCGACCCACTCAACCGCGCGCTGATCCTGTTGCACCTGGAAGATCGCAGCTATTCCGAAATCGCCGAAGTCCTCGGCATCAGCGAAACCAGCGTGGCGACCAAGATCAGTCGCATCAAGCAGAAACTGCGCGGCCAGATGACCGCGACCACCGGAGCGTGA
PROTEIN sequence
Length: 181
MDETDGDATPMTSREHQQRFESLLHEHRRIVFKVAGLYGRSPADRDDLVQEISAQLWRSFARYDERRAKFSTWLYRIALNVAISQARRWPDLDRCEPLETRHLETIGGEAVVEPDERLVALHAFIGQLDPLNRALILLHLEDRSYSEIAEVLGISETSVATKISRIKQKLRGQMTATTGA*