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scnpilot_solids2_trim150_scaffold_3954_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3954_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(111..2870)
DNA (2760bp) protein (920aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD71_9GAMM
Putative lipoprotein {ECO:0000313|EMBL:EIL97412.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zinc carboxypeptidase
scnpilot_solids2_trim150_scaffold_3954_curated_2
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2937..3848)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DC0400
Xylanase {ECO:0000313|EMBL:EPX62735.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
G-D-S-L family lipolytic protein
scnpilot_solids2_trim150_scaffold_3954_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3989..4531
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L3_9GAMM
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EIL94754.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
scnpilot_solids2_trim150_scaffold_3954_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4534..5199
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94755.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3954_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5323..5775)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94756.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3954_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6046..6915)
DNA (870bp) protein (290aa)
Thioredoxin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQL5_9GAMM
Thioredoxin {ECO:0000313|EMBL:EIM01757.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
thioredoxin
scnpilot_solids2_trim150_scaffold_3954_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7035..7682
DNA (648bp) protein (216aa)
Putative paraquat-inducible protein A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQL6_9GAMM
Putative paraquat-inducible protein A {ECO:0000313|EMBL:EIM01758.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative paraquat-inducible protein A
scnpilot_solids2_trim150_scaffold_3954_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7679..8332
DNA (654bp) protein (218aa)
Putative paraquat-inducible protein A n=1 Tax=Rhodanobacter denitrificans RepID=I4WTF2_9GAMM
putative paraquat-inducible protein A
Putative paraquat-inducible protein A {ECO:0000313|EMBL:AGG88286.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3954_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8325..10019
DNA (1695bp) protein (565aa)
PqiB family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTF3_9GAMM
qaraquat-inducible protein B
Qaraquat-inducible protein B {ECO:0000313|EMBL:AGG88287.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3954_curated_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10016..10630
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87315.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3954_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10762..11181
DNA (420bp) protein (140aa)
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Leucine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTF5_9GAMM
Displaying 11 items

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