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scnpilot_solids2_trim150_scaffold_1772_curated_34

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 30041..30646

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ99_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 200.0
  • Bit_score: 329
  • Evalue 3.10e-87
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 200.0
  • Bit_score: 329
  • Evalue 9.90e-88
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:AGG89768.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 200.0
  • Bit_score: 329
  • Evalue 4.40e-87

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAGTCCCGTCCGGACCGTGCCAGCCGAATCCGCCGCCGCCAGCGCCAGCGAATCGCCCGACCGGCGCCGGTCGGCGTGGATGGCCGCGGCGCAGGCCGGCGACCGCCGTGCCTACGAAAAACTGCTGGCCGATTCGGTGGCGCTGATCCGCGCCGTGGCGCGGCGGCAGGGCGTCGCGCAGGATCAGCTGGATGACGTGGTGCAGGAAACCCTGCTCACCGTGCACCGCGTGCGCCAGACCTACGACCCCGGCCGATCCTACGATGCCTGGCTTGGCGCGATCGCCGCTCGGCGCGCGATCGACTCCCTGCGCCGTCGCGGTCGCCGCGACAGCCGCGAGCTGCACGACGAGTTCGCGCTCGACAACCACGCCGATGCCGACGATGCCAGCGCCGCCGCCGAAAACGAGCAGCGCGCACGACGCCTGCACGCGGCGATCGCCGCGTTGCCGCCCGGCCAGCGCGAGGCGGTGGAACAGCTGGGACTGCGCGAGCATTCGCTCAGCGAGGCGGCCGAGCTGACCGGGCGCAACACCGGCGCGCTGAAAGTGAACCTGCATCGCGCGCTCAAGGCGCTGCGCGAGCGTTTCCATGGAGAACCCTGA
PROTEIN sequence
Length: 202
MSPVRTVPAESAAASASESPDRRRSAWMAAAQAGDRRAYEKLLADSVALIRAVARRQGVAQDQLDDVVQETLLTVHRVRQTYDPGRSYDAWLGAIAARRAIDSLRRRGRRDSRELHDEFALDNHADADDASAAAENEQRARRLHAAIAALPPGQREAVEQLGLREHSLSEAAELTGRNTGALKVNLHRALKALRERFHGEP*