ggKbase home page

scnpilot_solids2_trim150_scaffold_109_curated_29

Organism: solids_Sphingobacteriales_1

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(28657..30264)

Top 3 Functional Annotations

Value Algorithm Source
peptide chain release factor 3 n=1 Tax=Segetibacter koreensis RepID=UPI00036D79B0 similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 528.0
  • Bit_score: 918
  • Evalue 4.20e-264
peptide chain release factor 3 (bRF-3); K02837 peptide chain release factor 3 similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 530.0
  • Bit_score: 896
  • Evalue 4.10e-258
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 530.0
  • Bit_score: 896
  • Evalue 1.80e-257

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1608
ATGCTTATCTTTGCGCCCTTTATGAAATATATTCCGGAAATTAACAGGCGTAAAAGTTTTGCCATTATCAGTCACCCCGATGCCGGGAAAACTACCTTAACAGAAAAATTCCTTTTGTTTGGAGGGGCCATTCAAACGGCAGGTGCCGTAAAAAGCAATAAAATAAAAAAGCATGCTACCAGCGATTTTATGGAGATAGAAAGGCAGAGGGGAATTAGCGTGGCCACCAGCGTAATGAGTTTTGAATACGAAGGCTACCTGGTAAACCTGCTGGATACCCCCGGCCATAAGGATTTTGCTGAAGATACCTACAGAACGCTTACTGCCGTAGACAGTGTAGTACTGGTAGTGGATAGTGTAAATGGGGTAGAAGCACAAACCCGGCGACTGATGGAAGTGATTGCTATGCGCAAAACCCCGGTAATTGTGTTTATCAATAAAATGGACCGGGATGGCAAGAACCGTTATGAACTGCTGGAAGAGATAGAAAATGAATTGAAGATACAATTGCATCCCATGACCTGGCCTATTAATAGTGGCAAGGACTTTAAAGGCGTGTACGATCTGAATGATAAAAGCCTGGTATTATTTGCAGCCGGTACCAAGGCAAATGAAGAAGATGTAGTGAAGATTGATGATTTATCGAGCCCGCTGTTACAAAAAAAAATTGGTGAAAAAGAAGCCGCTACCTTACGGGAAGATGTAGAATTAATTGATGGCGTATATGGGCCTTTGAATAAAAATGATTATTTGAGCGGCCAAACCGCCCCTGTATTTTTCGGGAGTGCCGTAAATAATTTTGGAGTAAAAGAAATGCTGGATACTTTTATTCGCATTGCGCCTACGCCCAGGCCCAGGCAAACTACTATAAGAGAAGTAAAACCCGAAGAAGAAAAATTCAGTGGATTTATTTTTAAGATACACGCCAACCTGGATCCCCGGCACCGGGACCGCATTGCTTTCTTAAGGGTGTGCAGCGGTAAGTTTAGCCGCAATACCTATTACCATCATGTAAGGATGAATAAAGATTTTCGGTTTAGCAATCCCTATACTTTTTTGGCCCGGCAAAAAGAAGTGATTGAGGATGCTTTCCCGGGTGATGTGGTGGGTTTATTTGATACCGGTAATTTTAAAATTGGCGATACCATTACAGAAGGTGAAGATTTTTTCTATACCGGGATTCCTAGTTTTTCACCTGAAATATTTAAAGAGGTGGTAAATAAAGATCCGTTAAAAACCAAGCAATTAGAAAAGGGACTGTTGCAACTTACAGATGAAGGGGTGGCACAGCTCTTCACCCAGTTTGGCGGAAATAAAAAAATAATAGGTTGTGTGGGAGAATTGCAGTTTGAAGTTATTCAGTACCGCCTCCTGCATGAATATGGCGCATCGGTTCAAATGAATAACCTGCCATTTTATAAAGCCTGCTGGCTTACCAGCAAAGACCCCAAAAAATTAGATGAGTTTACAAAATATAAGCAGGCTAATATCGCATTAGATAAAGATGGCCATTTAGTTTACCTGGCCCAAAGTGAATGGTTCTTAAATACTGAAATTCAAAACAACCCCGATATTGTATTTCATTTTAGCAGTGAAATACATAAATAA
PROTEIN sequence
Length: 536
MLIFAPFMKYIPEINRRKSFAIISHPDAGKTTLTEKFLLFGGAIQTAGAVKSNKIKKHATSDFMEIERQRGISVATSVMSFEYEGYLVNLLDTPGHKDFAEDTYRTLTAVDSVVLVVDSVNGVEAQTRRLMEVIAMRKTPVIVFINKMDRDGKNRYELLEEIENELKIQLHPMTWPINSGKDFKGVYDLNDKSLVLFAAGTKANEEDVVKIDDLSSPLLQKKIGEKEAATLREDVELIDGVYGPLNKNDYLSGQTAPVFFGSAVNNFGVKEMLDTFIRIAPTPRPRQTTIREVKPEEEKFSGFIFKIHANLDPRHRDRIAFLRVCSGKFSRNTYYHHVRMNKDFRFSNPYTFLARQKEVIEDAFPGDVVGLFDTGNFKIGDTITEGEDFFYTGIPSFSPEIFKEVVNKDPLKTKQLEKGLLQLTDEGVAQLFTQFGGNKKIIGCVGELQFEVIQYRLLHEYGASVQMNNLPFYKACWLTSKDPKKLDEFTKYKQANIALDKDGHLVYLAQSEWFLNTEIQNNPDIVFHFSSEIHK*