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scnpilot_solids2_trim150_scaffold_1708_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1708_curated_1
unknown

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1..105
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1708_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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327..1448
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003660D02
Uncharacterized protein {ECO:0000313|EMBL:AHF17855.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
class-V aminotransferase
scnpilot_solids2_trim150_scaffold_1708_curated_3
unknown

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1462..1611
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1708_curated_4
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1651..2829
DNA (1179bp) protein (393aa)
hypothetical protein, partial n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI00035CE126
Uncharacterized protein {ECO:0000313|EMBL:KGL63580.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1708_curated_5
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2923..3243
DNA (321bp) protein (107aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8XRF8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAL66507.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
putative DNA binding protein
scnpilot_solids2_trim150_scaffold_1708_curated_6
Acinetobacter calcoaceticus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3240..4850
DNA (1611bp) protein (537aa)
M.AcuI n=1 Tax=Acinetobacter calcoaceticus RepID=E3VX86_ACICA
M.AcuI {ECO:0000313|EMBL:ADO24167.1}; TaxID=471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter calcoaceticus.;"
modification methyltransferase
scnpilot_solids2_trim150_scaffold_1708_curated_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5056..5427
DNA (372bp) protein (124aa)
30S ribosomal protein S6 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSD9_9SPHI
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
scnpilot_solids2_trim150_scaffold_1708_curated_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5420..5686
DNA (267bp) protein (89aa)
30S ribosomal protein S18 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB18_NIAKG
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
scnpilot_solids2_trim150_scaffold_1708_curated_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


5772..6218
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Segetibacter koreensis RepID=UPI0003751DC1
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
50S ribosomal protein L9P; K02939 large subunit ribosomal protein L9
scnpilot_solids2_trim150_scaffold_1708_curated_10
unknown

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6724..7296
DNA (573bp) protein (191aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1708_curated_11
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7391..8449
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037006B2
Uncharacterized protein {ECO:0000313|EMBL:KFC21506.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1708_curated_12
unknown

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8487..8693
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1708_curated_13
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9082..9525
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003450D50
Uncharacterized protein {ECO:0000313|EMBL:EJL59387.1}; Flags: Precursor; Fragment;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1708_curated_14
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9653..11812
DNA (2160bp) protein (720aa)
Serine protease, peptidase S9 family protein n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WNW8_9FLAO
Serine protease, peptidase S9 family protein {ECO:0000313|EMBL:KEY19602.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
serine protease, peptidase S9 family
scnpilot_solids2_trim150_scaffold_1708_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12085..12558
DNA (474bp) protein (158aa)
GAF domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLN7_9SPHI
Diguanylate cyclase {ECO:0000313|EMBL:AHF14583.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GAF domain-containing protein GafA; K07170 GAF domain-containing protein
scnpilot_solids2_trim150_scaffold_1708_curated_16
unknown

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comp(12681..13283)
DNA (603bp) protein (201aa)

This feature has no annotations

Displaying 16 items

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